This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LX9C.1

LOC_000LX9C.1
C. Galli, L. Pellegrinelli & E. Pariani

University of Milan, Department of Biomedical Sciences for Health

Sample details

Earliest release date
2019-03-03
Isolate name
IT_122016_6_FAE

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2019-03-03
NCBI update date
2019-03-03
INSDC accession

Submission details

Submission ID
MH454235.1
Submitting group
Date submitted
2026-10-09 13:33:52 UTC
Date released
2026-10-09 13:42:12 UTC

Clade

Clade EV-A71
C2

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
55
Total ambiguous nucs
2
Length
306 (4.1%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • T2624C
  • T2636A
  • G2639A
  • T2666A
  • A2669G
  • C2675T
  • C2702A
  • T2708C
  • G2711A
  • G2714A
  • T2720C
  • T2723C
  • A2729T
  • A2730G
  • G2732A
  • C2738A
  • T2744C
  • C2750T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K98E
  • VP1:R145E
  • VP1:F155Y
  • VP1:V156I
Deletions
N/A
Insertions
N/A

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