This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LX6J.1

India/LOC_000LX6J.1/2015-07-01
K. Tandel, S. Sharma, P. K. Dash, J. Shukla, M. M. Parida, P. Dash & M. Parida

Army Hospital (Research & Referral), Department of Lab Sciences and Molecular Biology

Sample details

Collection date
2015-07
Earliest release date
2018-10-05
Sampling location
India
Isolate name
Gwl-01 2015

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2018-10-05
NCBI update date
2018-10-05
INSDC accession

Host

Host

Submission details

Submission ID
MG516600.1
Submitting group
Date submitted
2026-07-01 18:03:48 UTC
Date released
2026-07-01 18:19:42 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
2
Total deleted nucs
106
Total frame shifts
1
Frame shifts
NS5:578-905(nt:9410-10395)
Length
202 (2.79%)
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • A9291C
  • T9294C
Deletions
9304-9409
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions
N/A
Deletions

NS5

NS5:542-577
Insertions
N/A

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