This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LX1U.1

unknown/LOC_000LX1U.1/unknown
J. Lemoine

Sample details

Earliest release date
2025-01-29

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2025-01-29
NCBI update date
2025-01-29
INSDC accession

Submission details

Submission ID
PC395791.1
Submitting group
Date submitted
2026-10-22 18:25:44 UTC
Date released
2026-10-22 18:41:09 UTC

Lineage

Lineage
1B

Files

Annotations

Alignment and QC

Total SNPs
47
Total deleted nucs
94
Total frame shifts
1
Frame shifts
NS5:898-905(nt:10372-10395)
Length
625 (6.52%)
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • C10408T
  • G10420A
  • C10422T
  • A10424T
  • A10426G
  • A10428T
  • G10430T
  • C10435T
  • A10436G
  • A10439G
  • G10444T
  • T10448C
  • G10455A
  • A10460G
  • G10468T
  • T10469G
  • G10470T
  • A10487G
Deletions
10314-10371, 10378-10406, 10475-10481
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions
N/A
Deletions

NS5

NS5:865-897
Insertions
N/A

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