This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LX1U.1

China/LOC_000LX1U.1/2017_TO_2018
H. Yu & Y. Zhou

Fudan University, School of Public Health, Key Laboratory of Public Health Safety, Ministry of Education

Sample details

Collection date
2017/2018
Earliest release date
2021-10-12
Sampling location
China
Isolate name
7587F1EV-A71

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-29 16:00insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2021-10-12
NCBI update date
2021-10-12
INSDC accession

Host

Host

Submission details

Submission ID
MT710443.1
Submitting group
Date submitted
2026-05-29 16:00:06 UTC
Date released
2026-05-29 16:07:57 UTC

Clade

Clade EV-A71
C4

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
182
Length
971 (13.1%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C2428G
  • T2432C
  • T2435C
  • A2438G
  • G2441A
  • C2444T
  • A2447G
  • T2456C
  • G2465A
  • T2471C
  • T2480C
  • T2483C
  • T2489C
  • A2491G
  • G2492A
  • C2501A
  • C2503A
  • A2504C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K18R
  • VP1:P22H
  • VP1:L24Q
  • VP1:P30Q
  • VP1:D31N
  • VP1:K98E
  • VP1:R145E
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S240T
  • VP1:E244K
  • VP1:S246P
  • VP1:I249V
  • VP1:S275A
  • VP1:D282N
  • VP1:S283T
  • VP1:T289A
  • VP1:A293S

VP3

  • VP3:A239G
Deletions
N/A
Insertions
N/A

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