This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LWV6.1

Germany/LOC_000LWV6.1/2018-08-01
V. M. Corman

Charite - Universitaetsmedizin Berlin, Institute of Virology

Sample details

Collection date
2018-08
Earliest release date
2019-04-27
Sampling location
Germany
Isolate name
CHVir-201/2018

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2019-04-27
NCBI update date
2019-04-27
INSDC accession

Host

Host

Submission details

Submission ID
MH824156.1
Submitting group
Date submitted
2026-07-01 18:03:48 UTC
Date released
2026-07-01 18:19:42 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
39
Total deleted nucs
341
Total frame shifts
1
Frame shifts
NS5:465-905(nt:9071-10395)
Length
217 (5.06%)
Variant
False

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • C9072T
  • A9084C
  • G9087A
  • C9090T
  • G9093A
  • A9096C
  • C9123A
  • A9126G
  • T9129C
  • T9135C
  • C9144T
  • G9147A
  • G9153C
  • T9156A
  • T9159C
  • T9180G
  • A9183T
  • A9186G
Deletions
8961-9070, 9277-9507
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions
N/A
Deletions

NS5

NS5:428-464
Insertions
N/A

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