This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LWJU.1

Greece/AT1-2013/2013-05-28
E. Patsoula, G. Spanakos, N. Tegos, G. Balatsos & N. Vakalis

Entomology and Tropical Diseases, Parasitology, National School of Public Health, 196, Alexandras Avenue, 11521, Athens

Sample details

Collection date
2013-05-28
Earliest release date
2014-04-21
Sampling location
Greece (Attica, Athens, Pikrodafni stream, Paleo Faliro)
Isolate name
AT1-2013

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2014-04-21
NCBI update date
2014-04-21
INSDC accession

Host

Host

Submission details

Submission ID
HG973489.1
Submitting group
Date submitted
2026-08-19 19:22:32 UTC
Date released
2026-08-19 19:38:27 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
36
Length
167 (1.51%)
Amino Acid Mutations from founder clade
  • NS5:V509I
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • C9123A
  • A9126G
  • T9129C
  • T9135C
  • C9144T
  • G9147A
  • G9153C
  • T9156A
  • T9159C
  • T9180G
  • A9183T
  • A9186G
  • A9201T
  • T9204A
  • G9205A
  • C9207T
  • G9210A
  • G9216A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:V509I
  • NS5:R522K
  • NS5:R527K
Deletions
N/A
Insertions
N/A

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