This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LWJU.1

China/LOC_000LWJU.1/2019
H. Zeng

Guangdong Provincial Centre for Disease Control and Prevention, Institute of Pathogenic Microbiology

Sample details

Collection date
2019
Earliest release date
2021-07-31
Sampling location
China
Isolate name
2019-EV-A71-480

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-29 16:00insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2021-07-31
NCBI update date
2021-07-31
INSDC accession

Host

Host

Submission details

Submission ID
MT708793.1
Submitting group
Date submitted
2026-05-29 16:00:06 UTC
Date released
2026-05-29 16:07:57 UTC

Clade

Clade EV-A71
C1-like

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
152
Length
891 (12%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • G2441A
  • C2444T
  • G2465A
  • T2471C
  • T2483C
  • G2484A
  • T2489C
  • A2491G
  • G2492A
  • C2501T
  • C2503A
  • T2513A
  • C2519T
  • C2527A
  • A2528G
  • G2529A
  • C2531T
  • C2534G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:V16M
  • VP1:K18R
  • VP1:P22Q
  • VP1:P30Q
  • VP1:D31N
  • VP1:K98E
  • VP1:R145E
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S240T
  • VP1:E244K
  • VP1:S246P
  • VP1:I262V
  • VP1:S275A
  • VP1:D282N
Deletions
N/A
Insertions
N/A

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