This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LWJU.1

Turkey/HMN.W68/2013-09-19
K. Ergunay & A. Ozkul

Hacettepe University Faculty of Medicine, Department of Medical Microbiology Virology Unit

Sample details

Collection date
2013-09-19
Earliest release date
2015-08-29
Sampling location
Turkey
Isolate name
HMN.W68

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2015-08-29
NCBI update date
2015-08-29
INSDC accession

Host

Host

Submission details

Submission ID
KJ433825.1
Submitting group
Date submitted
2026-09-09 16:34:08 UTC
Date released
2026-09-09 16:47:17 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
5
Total deleted nucs
198
Length
256 (4.12%)
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • C1484T
  • A1512G
  • G1545A
  • T1608C
  • T1638C
Deletions
1284-1481
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

env

  • env:Q94C
Deletions

env

env:97-173
Insertions
N/A

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