This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.
X
Loculus
Organisms
West Nile Virus
SeqSets
Login
Loculus
Organisms
Crimean-Congo Hemorrhagic Fever Virus
CCHF (Multi-Ref)
Test Dummy Organism
Test organism (with files)
Ebola Sudan
Enterovirus
Test organism (without alignment)
West Nile Virus
SeqSets
Login
Docs
API docs
West Nile Virus
|
Browse data
Submit sequences
Select organism section
Browse data
Submit sequences
LOC_000LWF1.1
Download
Download FASTA
Download metadata TSV
LOC_000LWF1.1
K. J. Hennessy &
P. W. Hayes
Sample details
Earliest release date
2012-05-31
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-02-23 00:20
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2012-05-31
NCBI update date
2012-05-31
INSDC accession
HV572308.1
Submission details
Submission ID
HV572308.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-02-23 00:19:23 UTC
Date released
2026-02-23 00:28:20 UTC
Lineage
Lineage
1A
Files
Annotations
LOC_000LWF1.1.embl
Alignment and QC
Total SNPs
3
Total deleted nucs
1
Total unknown nucs
5
Total frame shifts
1
Frame shifts
env:45-501(nt:1097-2469)
Length
968 (8.74%)
Nucleotide mutations
Mutations called relative to the
NC_009942.1
reference
Substitutions
T
1442
C
C
1465
T
C
2010
T
Deletions
1096
Insertions
N/A
Amino acid mutations
Mutations called relative to the
NC_009942.1
reference
Substitutions
N/A
Deletions
env
env:44
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
Report an issue with this sequence or metadata
Create GitHub issue