This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LWC7.1

Spain/LOC_000LWC7.1/2016
R. Gonzalez-Sanz, A. Otero & M. Cabrerizo

Instituto de Salud Carlos III, National Centre for Microbiology, Virology

Sample details

Collection date
2016
Earliest release date
2019-02-18
Sampling location
Spain
Isolate name
35567_SP_JUN16_VA

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2019-02-18
NCBI update date
2019-02-18
INSDC accession

Host

Host

Submission details

Submission ID
MH395036.1
Submitting group
Date submitted
2026-10-05 10:33:48 UTC
Date released
2026-10-05 10:42:23 UTC

Clade

Clade EV-A71
C1-like

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
66
Length
359 (4.85%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • C2930T
  • A2936G
  • C2939G
  • T2942C
  • T2943C
  • G2945C
  • T2948A
  • C2953A
  • G2957T
  • G2963C
  • C2966T
  • C2981T
  • A2984G
  • C2986T
  • A2987G
  • C2990A
  • C2993T
  • A2996C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S240T
  • VP1:E244K
  • VP1:S246P
  • VP1:I262V
  • VP1:S275A
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue