This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LMY9.1

Germany/LOC_000LMY9.1/2004
A. Mirand, I. Schuffenecker, C. Henquell, G. Billaud, G. Jugie, D. Falcon, A. Mahul, C. Archimbaud, E. Terletskaia-Ladwig, S. Diedrich, H. P. Huemer, M. Enders, B. Lina, H. Peigue-Lafeuille, J. L. Bailly, D. Antona & J. J. Chomel

Schuffenecker I., Centre National de Reference des Enterovirus, Laboratoire de Virologie Est- Hospices Civils de Lyon, 59, boulevard Pinel, 69677 Bron Cedex

Sample details

Collection date
2004
Earliest release date
2010-06-02
Sampling location
Germany (Stuttgart)
Isolate name
STU408070_GER04

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2010-06-02
NCBI update date
2016-07-25
INSDC accession

Submission details

Submission ID
FN649253.1
Submitting group
Date submitted
2026-10-01 16:14:05 UTC
Date released
2026-10-01 16:17:34 UTC

Clade

Clade EV-A71
C4

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
154
Length
891 (12%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • G2441A
  • C2444T
  • A2447G
  • G2459A
  • G2465A
  • C2468T
  • T2471C
  • T2480C
  • A2491G
  • G2492A
  • C2501T
  • C2503A
  • T2508C
  • T2513G
  • C2525T
  • C2527A
  • A2528G
  • G2529A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K18R
  • VP1:P22Q
  • VP1:P30Q
  • VP1:D31N
  • VP1:K98E
  • VP1:R145E
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S240T
  • VP1:E244K
  • VP1:S246P
  • VP1:I249V
  • VP1:S275A
  • VP1:D282N
  • VP1:T289V
Deletions
N/A
Insertions
N/A

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