This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000L6Q6.1

Israel/LOC_000L6Q6.1/2021-07-05
M. Weil, I. Bar-Or, R. Shatzman-Steuerman, D. Sofer, V. Levi, L. Weiss, R. Vasserman, K. Kestin, M. Elul, N. Levi, R. Alkrenawi, E. Mendelson, M. Mandelboim & O. Erster

Central Virology lab, Israel Ministry of health

Sample details

Collection date
2021-07-05
Earliest release date
2022-02-07
Sampling location
Israel
Isolate name
ISR/05/07/2021

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-01 15:12insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2022-02-07
NCBI update date
2022-02-07
INSDC accession

Submission details

Submission ID
OM251528.1
Submitting group
Date submitted
2026-04-01 15:12:22 UTC
Date released
2026-04-01 15:37:16 UTC

Clade

Clade EV-D68
B3

Genotype

Genotype
EV-D68

Alignment and QC

Total SNPs
49
Total ambiguous nucs
1
Length
280 (3.79%)
Variant
False

Nucleotide mutations

Mutations called relative to the AY426531.1 reference

Substitutions

  • T2526A
  • C2529A
  • C2550T
  • A2568G
  • G2577A
  • T2580C
  • G2586A
  • G2589C
  • G2592A
  • G2595T
  • T2596C
  • T2613C
  • G2614A
  • G2619A
  • C2625T
  • C2626T
  • A2628G
  • A2634G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY426531.1 reference

Substitutions

VP1

  • VP1:G76S
  • VP1:K84R
  • VP1:N90D
  • VP1:A92T
  • VP1:S95T
  • VP1:G97Q
  • VP1:H99D
  • VP1:K110R
Deletions
N/A
Insertions
N/A

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