This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000KP22.1

Slovakia/LOC_000KP22.1/2013-01-01
K. Bhide, S. Dolinska, T. Csank, J. Pistl & M. Bhide

University of Veterinary Medicine and Pharmacy, Department of Microbiology and Immunology

Sample details

Collection date
2013
Earliest release date
2014-07-15
Sampling location
Slovakia
Isolate name
WNV SK 34

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2014-07-15
NCBI update date
2014-07-15
INSDC accession

Host

Host

Submission details

Submission ID
KJ725266.1
Submitting group
Date submitted
2026-07-01 18:03:37 UTC
Date released
2026-07-01 18:18:29 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
63
Total deleted nucs
548
Total frame shifts
1
Frame shifts
NS5:642-905(nt:9602-10395)
Length
353 (8.17%)
Amino Acid Mutations from founder clade
  • NS5:R403G
  • NS5:N450H
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • C8721T
  • C8730T
  • G8736T
  • G8739A
  • G8742A
  • A8754G
  • G8757A
  • C8766T
  • G8769A
  • A8772G
  • T8778A
  • A8781G
  • G8784T
  • A8793G
  • G8796C
  • G8799A
  • G8805C
  • C8811T
Deletions
9054-9601
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:E390D
  • NS5:R392K
  • NS5:R403G
  • NS5:R422K
  • NS5:S423N
Deletions

NS5

NS5:459-641
Insertions
N/A

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