This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000KP22.1

Slovakia/LOC_000KP22.1/2013-01-01
K. Bhide, S. Dolinska, T. Csank, J. Pistl & M. Bhide

University of Veterinary Medicine and Pharmacy, Department of Microbiology and Immunology

Sample details

Collection date
2013
Earliest release date
2014-07-15
Sampling location
Slovakia
Isolate name
WNV SK 86

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-22 15:07insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2014-07-15
NCBI update date
2014-07-15
INSDC accession

Host

Host

Submission details

Submission ID
KJ725268.1
Submitting group
Date submitted
2026-06-22 15:07:32 UTC
Date released
2026-06-22 15:22:28 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
20
Total deleted nucs
1161
Length
353 (13.7%)
Amino Acid Mutations from founder clade
  • NS5:R403K
  • NS5:E442K
  • NS5:H450N
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C8721T
  • G8736A
  • A8745G
  • C8751T
  • C8802T
  • C8811T
  • G8814A
  • T8839C
  • G8888A
  • C8898T
  • T8911C
  • T8937C
  • A8967G
  • G9004A
  • T9012C
  • T9027C
  • C9028A
  • T9033C
  • T9039C
  • A9054C
Deletions

9055-10215
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:R403K
  • NS5:E442K
  • NS5:H450N
Deletions
N/A
Insertions
N/A

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