This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00001F3.1

Display Name: Russia/LOC_00001F3.1
I. D. Petrova, S. V. Seregin, V. S. Petrov, O. I. Vyshemirski, I. I. Kuzina, D. K. L'vov, E. I. Samokhvalov, G. I. Tyunikov, V. V. Gutorov, L. N. Yashina, S. V. Netesov, D. K. Lvov & G. I. Tyunnikov

Submission details

Submission ID
AF481801.1.S
Submitting group
Date submitted
2025-07-04 13:11:18 UTC
Date released
2025-07-04 13:11:41 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-04 13:11insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
State Research Center of Virology and Biotechnology 'Vector', Biochemistry of Viruses

Alignment and QC metrics S

Completeness S
27.93%
Length S
467
Total ambiguous nucs S
0
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
63
Total unknown nucs S
0

Sample details

Earliest release date
2002-03-19
Collection subdivision level 1
Astrahan region
Collection country
Russia
Collection date (upper bound)
2002-03-19
Isolate name
ASTR/TI28870

Host

Host name scientific
Ixodoidea
Host taxon id

INSDC

INSDC accession S
NCBI release date
2002-03-19

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:C829T
  • S:C836T
  • S:T847C
  • S:A849G
  • S:G850A
  • S:T862C
  • S:G864A
  • S:C871T
  • S:C874T
  • S:T895C
  • S:T898G
  • S:T904C
  • S:G913A
  • S:G919A
  • S:C925T
  • S:A943T
  • S:A956G
  • S:C958T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:K265R
  • NP:R270K
  • NP:S301G
  • NP:A307P
  • NP:Y311F
  • NP:V327I
    • Deletions
    None
    Insertions
    None

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