This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SDLV.1

China/LOC_000SDLV.1/2010-06-14
S. Ma, Y. Zhang, T. Yang & Q. Li

Institute of Medical Biology, Chinese Academy of Medical Sciences and Peking Union Medical, Molecular Epidemiology

Sample details

Collection date
2010-06-14
Earliest release date
2014-06-30
Sampling location
China
Isolate name
KM407/CHN/2010

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2014-06-30
NCBI update date
2014-06-30
INSDC accession

Host

Host

Submission details

Submission ID
KF142326.1
Submitting group
Date submitted
2026-09-09 16:34:13 UTC
Date released
2026-09-09 16:39:22 UTC

Clade

Clade CV-A16
B1c

Genotype

Genotype
CV-A16

Alignment and QC

Total SNPs
60
Length
264 (3.56%)

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions
  • C2604G
  • C2607G
  • T2610G
  • T2613A
  • A2619T
  • C2620A
  • A2621G
  • G2622T
  • T2625C
  • G2626A
  • T2634C
  • A2637T
  • A2640G
  • C2643G
  • C2644A
  • G2646A
  • T2670A
  • A2673G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U05876.1 reference

Substitutions

VP1

  • VP1:Q59S
  • VP1:E61K
  • VP1:T79A
  • VP1:M119L
  • VP1:A139V
Deletions
N/A
Insertions
N/A

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