This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SD9J.1

Pakistan/LOC_000SD9J.1/2019-05-08
Shahid MF, Yaqub T, Ali M, Ul-Rahman A, Bente DA, M. F. Shahid, T. Yaqub, M. Ali, A. Ul-Rahman & D. A. Bente

University of Veterinary and Animal Sciences, Institute of Microbiology

Sample details

Collection date
2019-05-08
Earliest release date
2021-04-21
Sampling location
Pakistan
Isolate name
PAK-ATK-T/426

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-10 13:54insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2021-04-21
INSDC accession S

Submission details

Submission ID
MW915558.1.S
Submitting group
Date submitted
2026-03-10 13:54:32 UTC
Date released
2026-03-10 14:01:01 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs S
28
Length S
195 (10.8%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • G339A
  • C342A
  • G351A
  • A363G
  • T369C
  • A378G
  • T387A
  • C390T
  • A393C
  • G409T
  • T414C
  • A423G
  • C429T
  • T430C
  • G432C
  • A435G
  • A441G
  • G444A
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:D116E
  • NP:A124S
Deletions
N/A
Insertions
N/A

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