This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SD9J.1

Pakistan/LOC_000SD9J.1/2018
M. Umair

National Institute of Health, Department of Virology

Sample details

Collection date
2018
Earliest release date
2022-01-12
Sampling location
Pakistan
Isolate name
NIH-84/Pakistan/2018

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-27 15:36insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2022-01-12
INSDC accession S

Submission details

Submission ID
MZ287861.1.S
Submitting group
Date submitted
2026-02-27 15:36:32 UTC
Date released
2026-02-27 15:42:53 UTC

Host

Host

Lineage

Segment S Lineage
IV.2

Files

Annotations

Alignment and QC

Total SNPs S
38
Length S
248 (14.8%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • G292A
  • C295T
  • A298T
  • C310T
  • C316T
  • A322G
  • A325G
  • G328A
  • T334G
  • A337G
  • G367A
  • C370T
  • T382C
  • T385C
  • G391A
  • A394G
  • C400T
  • C403G
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:D116E
  • NP:T124A
  • NP:G125N
  • NP:N150H
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue