This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SD7N.1

Russia/LOC_000SD7N.1/2016-06-23
A. Volynkina, E. Kotenev & A. Kolosov

Stavropol State Research Anti-Plague Institute, Laboratory on Natural Focal Infections

Sample details

Collection date
2016-06-23
Earliest release date
2020-07-27
Sampling location
Russia
Isolate name
130-STV/HU-2016

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2020-07-27
INSDC accession S

Host

Host

Submission details

Submission ID
MN624350.1.S
Submitting group
Date submitted
2026-07-21 15:36:16 UTC
Date released
2026-07-21 15:40:16 UTC

Lineage

Segment S Lineage
unassigned

Files

Annotations

Alignment and QC

Total SNPs S
98
Length S
538 (32.2%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • C115T
  • A121G
  • G123T
  • T127C
  • A130G
  • C154T
  • T157C
  • T163C
  • G171A
  • T175G
  • C178A
  • T182C
  • G184A
  • G189A
  • G196C
  • T199C
  • G202A
  • C208A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:G23V
  • NP:S39N
  • NP:R45K
  • NP:A100T
  • NP:S109N
  • NP:T124A
  • NP:G125S
  • NP:N150S
  • NP:A154S
  • NP:S165P
  • NP:G185S
  • NP:H195R
  • NP:D199E
Deletions
N/A
Insertions
N/A

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