This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SB7Q.1

Turkey/LOC_000SB7Q.1/2017
M. O. Timurkan & H. Aydin

Ataturk University, Faculty of Veterinary Medicine, Departmet of Virology

Sample details

Collection date
2017
Earliest release date
2020-03-28
Sampling location
Turkey
Isolate name
TR/ERZINCAN2013/OHE/26/M

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-13 15:41insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2020-03-28
INSDC accession M

Submission details

Submission ID
MT178317.1.M
Submitting group
Date submitted
2026-03-13 15:41:04 UTC
Date released
2026-03-13 15:46:38 UTC

Host

Host

Files

annotations

Alignment and QC

Total SNPs M
80
Length M
422 (7.73%)
Variant M
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

M segment

  • T4672C
  • A4674G
  • A4685G
  • A4690T
  • C4697A
  • A4709G
  • G4714A
  • C4720A
  • A4722C
  • A4723G
  • A4725G
  • A4726G
  • T4738A
  • T4739C
  • G4741A
  • C4744T
  • A4747G
  • T4750C
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

GPC

  • GPC:K1529R
  • GPC:K1533E
  • GPC:E1534D
  • GPC:Q1537K
  • GPC:N1541D
  • GPC:E1545A
  • GPC:Q1546R
  • GPC:N1564D
  • GPC:K1569R
  • GPC:N1586S
  • GPC:G1590S
  • GPC:I1591V
  • GPC:V1595F
  • GPC:F1600L
  • GPC:T1601L
  • GPC:T1604A
  • GPC:I1607V
  • GPC:I1610V
Deletions
N/A
Insertions
N/A

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