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LOC_000SB7Q.1
Download
Download FASTA
Download metadata TSV
Spain/LOC_000SB7Q.1/2017
A. Moraga Fernandez,
L. Royo-Hernandez,
M. A. Habela,
F. Ruiz Fons,
R. Calero-Bernal,
C. Gortazar,
J. de la Fuente &
I. G. Fernandez de Mera
Instituto de Investigacion en Recursos Cinegeticos, Sanidad Animal
Sample details
Collection date
2017
Earliest release date
2019-09-15
Sampling location
Spain
Isolate name
F7.107
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-06-22 15:08
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2019-09-15
INSDC accession S segment
MK297936.1
Host
Host
hard ticks; hardbacked ticks; scale ticks (Hyalomma lusitanicum)
Submission details
Submission ID
MK297936.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-06-22 15:08:50 UTC
Date released
2026-06-22 15:11:41 UTC
Clade & Lineage
Closest reference S segment
S1 (OL774851.1) (variant)
Files
Annotations
LOC_000SB7Q.1.embl
Alignment and QC
Total SNPs S segment
33
Length S segment
212 (11.7%)
Nucleotide mutations
Mutations called relative to the
NC_005301.3
&
OL774851.1
references
Substitutions
S segment
A
252
C
T
258
C
T
273
C
G
282
T
C
294
T
C
300
T
G
306
C
A
309
G
T
318
A
A
321
G
C
327
T
G
330
A
G
339
A
C
342
A
T
348
C
G
351
A
A
363
G
G
365
A
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
&
OL774851.1
references
Substitutions
NP
NP:
S
109
N
NP:
D
116
E
NP:
A
124
S
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L segment
S segment
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