This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SB5U.1

Turkey/LOC_000SB5U.1/2012-04-16
T. Aligholipour Farzani, A. Hanifehnezhad, K. Foldes, K. Ergunay, E. Yilmaz, H. Hashim Mohamed Ali, A. Ozkul, T. A. Farzani & H. H. Muhamed Ali

Faculty of Veterinary Medicine, Ankara University, Department of Virology

Sample details

Collection date
2012-04-16
Earliest release date
2019-02-19
Sampling location
Turkey
Isolate name
Ank2

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-02 13:18insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2019-02-19
INSDC accession S

Host

Host

Submission details

Submission ID
MK309333.1.S
Submitting group
Date submitted
2026-06-02 13:18:49 UTC
Date released
2026-06-02 13:21:57 UTC

Lineage

Segment S Lineage
V

Files

Annotations

Alignment and QC

Total SNPs S
193
Length S
1371 (82%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • A92T
  • T93G
  • G99A
  • G100T
  • T101G
  • A109G
  • C115T
  • G134A
  • C142T
  • T157C
  • C166T
  • G171A
  • T175A
  • C178A
  • T182C
  • C187T
  • G189A
  • T199C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:M13W
  • NP:R15N
  • NP:W16G
  • NP:V27M
  • NP:S39N
  • NP:R45K
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:T124A
  • NP:G125N
  • NP:H195R
  • NP:D199E
  • NP:I246V
  • NP:K265R
  • NP:R270K
  • NP:S301G
  • NP:A307P
Deletions
N/A
Insertions
N/A

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