This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SB5U.1

United_Arab_Emirates/LOC_000SB5U.1/2019-04-28
J. V. Camp, D. Ahmed, B. M. Osman, M. S. Shah, B. Howarth, T. Khafaga, P. Weidinger, N. Karuvantevida, J. Kolodziejek, H. Mazrooei, N. Wolf, T. Loney, N. Nowotny, M. O. Babiker & M. Sher Shah

University of Veterinary Medicine Vienna, Institute of Virology

Sample details

Collection date
2019-04-28
Earliest release date
2020-03-22
Sampling location
United Arab Emirates
Isolate name
ACM51

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-19 13:57insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2020-03-22
INSDC accession S

Host

Host

Submission details

Submission ID
MN516485.1.S
Submitting group
Date submitted
2026-05-19 13:57:35 UTC
Date released
2026-05-19 14:02:12 UTC

Lineage

Segment S Lineage
III

Files

Annotations

Alignment and QC

Total SNPs S
59
Length S
492 (29.4%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • C166T
  • C178A
  • T181C
  • G184A
  • C187A
  • G190A
  • G196A
  • T199C
  • G202A
  • C208T
  • T211C
  • C217T
  • C235T
  • G271A
  • G292A
  • C295T
  • T303C
  • T304C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:D44E
  • NP:V83A
  • NP:T124A
  • NP:G125S
  • NP:A154S
  • NP:L179Q
  • NP:D186E
  • NP:H195R
Deletions
N/A
Insertions
N/A

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