This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SANU.1

Display Name: Norway/LOC_000SANU.1/2003-08
E. Witso, G. Palacios, O. Cinek, L. C. Stene, B. Grinde, D. Janowitz, W. I. Lipkin & K. S. Ronningen

Sample details

Collection date
2003-08
Collection date (lower bound)
2003-08-01
Collection date (upper bound)
2003-08-31
Earliest release date
2006-11-07
Collection country
Norway
Isolate name
NO-1049

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-27 14:19insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Norwegian Institute of Public Health, Div. of Epidemiology

INSDC

NCBI release date
2006-11-07
INSDC accession CV-A10

Alignment and QC metrics CV-A10

Length CV-A10
627
Total SNPs CV-A10
125
Total inserted nucs CV-A10
0
Total deleted nucs CV-A10
0
Total ambiguous nucs CV-A10
0
Total unknown nucs CV-A10
0
Total frame shifts CV-A10
0
Completeness CV-A10
8.46%

Submission details

Submission ID
DQ317289.1.CV-A10
Submitting group
Date submitted
2025-10-27 14:18:47 UTC
Date released
2025-10-27 14:24:56 UTC

Clade

Clade CV-A10
C

Genotype

Genotype
CV-A10

Files

Annotations

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions

  • A2901T
  • A2907T
  • G2919A
  • A2922G
  • G2925T
  • T2940C
  • G2943A
  • A2952G
  • G2955A
  • T2961C
  • C2967A
  • G2968A
  • T2976C
  • A2985T
  • A2991T
  • G3000A
  • A3003C
  • C3009T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the AY421767.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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