This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.
X
Loculus
Organisms
Enterovirus
SeqSets
Login
Loculus
Organisms
CCHF (Multi-Ref)
Crimean-Congo Hemorrhagic Fever Virus
Ebola Sudan
Enterovirus
Test Dummy Organism
Test organism (with files)
Test organism (without alignment)
West Nile Virus
SeqSets
Login
Docs
API docs
Enterovirus
|
Browse data
Submit sequences
Select organism section
Browse data
Submit sequences
LOC_000SANU.1
Download
Download FASTA
Download metadata TSV
Singapore/LOC_000SANU.1/2008-04-07
Y. Wu,
A. Yeo,
M. C. Phoon,
E. L. Tan,
C. L. Poh,
S. H. Quak,
V. T. Chow &
V. T. K. Chow
National University of Singapore, Microbiology
Sample details
Collection date
2008-04-07
Earliest release date
2009-12-19
Sampling location
Singapore
Isolate name
NUH0022/SIN/08
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2009-12-19
NCBI update date
2011-08-25
INSDC accession
GU198754.1
Host
Host
human (Homo sapiens)
Submission details
Submission ID
GU198754.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-07-09 13:57:45 UTC
Date released
2026-07-09 14:01:19 UTC
Clade
Clade EV-A71
C
Genotype
Genotype
EV-A71
Alignment and QC
Total SNPs
29
Length
375 (5.06%)
Nucleotide mutations
Mutations called relative to the
U22521.1
reference
Substitutions
T
207
C
G
208
T
C
209
A
A
212
G
G
259
A
C
261
T
A
267
G
G
269
A
T
279
C
C
308
A
C
333
T
T
337
C
G
358
A
G
362
A
T
388
C
T
408
A
A
409
G
C
410
T
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
U22521.1
reference
Substitutions
N/A
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
Report an issue with this sequence or metadata
Create GitHub issue