This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S633.1

Iran/LOC_000S633.1/2015-10-01
M. Salehi-Vaziri, V. Baniasadi, M. Mirghiasi, T. Jalali, S. Khakifirouz, S. Azad-Manjiri, R. Zarandi & M. Fazlalipour

Tehran University of Medical Sciences, Virology

Sample details

Collection date
2015-10-01
Earliest release date
2016-03-23
Sampling location
Iran
Isolate name
Iran-4675

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-28 14:54insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2016-03-23
INSDC accession S

Host

Host

Submission details

Submission ID
KT899991.1.S
Submitting group
Date submitted
2026-04-28 14:53:37 UTC
Date released
2026-04-28 15:02:21 UTC

Lineage

Segment S Lineage
VI

Files

Annotations

Alignment and QC

Total SNPs S
96
Length S
516 (30.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • C145T
  • T163C
  • C166T
  • G169A
  • G171A
  • T172C
  • T175G
  • C178T
  • T181C
  • T182C
  • G184A
  • T198A
  • T199C
  • G202A
  • C214A
  • C238T
  • C244T
  • T253C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:S39N
  • NP:F48Y
  • NP:A100T
  • NP:G101S
  • NP:V117I
  • NP:T124S
  • NP:G125S
  • NP:V141I
  • NP:A146T
  • NP:E161D
  • NP:V163L
  • NP:M164V
  • NP:S165P
  • NP:L179I
  • NP:G185N
  • NP:V198I
  • NP:D199E
Deletions
N/A
Insertions
N/A

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