This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S633.1

Armenia/LOC_000S633.1/2022
A. Zhirova, Y. Lisitskaya, A. Volynkina, A. Manucharyan & G. Melik-Andreasyan

Stavropol State Research Anti-Plague Institute, Laboratory for Diagnostics of Viral Infections

Sample details

Collection date
2022
Earliest release date
2025-03-01
Sampling location
Armenia
Isolate name
372-ARM-TI-2022

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2025-03-01
INSDC accession S segment

Host

Host

Submission details

Submission ID
PV033791.1.S
Submitting group
Date submitted
2026-09-11 12:57:03 UTC
Date released
2026-09-11 13:01:51 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
188
Length S segment
1449 (80.2%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • A51G
  • T63C
  • A65G
  • A93G
  • A98T
  • C99T
  • A105G
  • G118A
  • C126T
  • T141C
  • C150T
  • G155A
  • T159A
  • T166C
  • C171T
  • A186G
  • T195C
  • C201T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:N9S
  • NP:Y20F
  • NP:V27M
  • NP:S39N
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:Q179L
  • NP:D199E
  • NP:K265G
  • NP:R270K
  • NP:A307P
  • NP:Y311F
  • NP:Y315H
  • NP:N419S
  • NP:R428K
Deletions
N/A
Insertions
N/A

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