This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S633.1

China/LOC_000S633.1/2008-05
Y. Q. He, L. Chen, W. B. Xu, H. Yang, H. Z. Wang, W. P. Zong, H. X. Xian, H. L. Chen, X. J. Yao, Z. L. Hu, M. Luo, H. L. Zhang, H. W. Ma, J. Q. Cheng, Q. J. Feng, D. J. Zhao & Y.-Q. He

Shenzhen University, School of Life Sciences

Sample details

Collection date
2008-05
Earliest release date
2013-07-29
Sampling location
China
Isolate name
JB14080134

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2013-07-29
NCBI update date
2014-04-25
INSDC accession

Host

Host

Submission details

Submission ID
KC867018.1
Submitting group
Date submitted
2026-09-09 16:34:13 UTC
Date released
2026-09-09 16:39:22 UTC

Clade

Clade CV-A10
C

Genotype

Genotype
CV-A10

Alignment and QC

Total SNPs
210
Length
894 (12.1%)

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions
  • C2439T
  • C2445T
  • G2448A
  • C2457A
  • C2463T
  • T2470C
  • A2473G
  • C2475A
  • T2481A
  • T2483C
  • G2487C
  • C2488A
  • G2490A
  • C2493T
  • A2496T
  • C2498G
  • T2499C
  • G2504C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY421767.1 reference

Substitutions

VP1

  • VP1:S13G
  • VP1:V16A
  • VP1:T21S
  • VP1:G23A
  • VP1:Q24T
  • VP1:D25N
  • VP1:N27E
  • VP1:T28S
  • VP1:G31N
  • VP1:A33T
  • VP1:M70V
  • VP1:A78T
  • VP1:S81N
  • VP1:V107T
  • VP1:F148Y
  • VP1:T219I
  • VP1:Q223L
  • VP1:V240E
Deletions
N/A
Insertions
N/A

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