This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S633.1

Kazakhstan/LOC_000S633.1/2015
P. Deryabin, B. Atshabar, Y. Sansyzbaev, V. Berezin, T. Nurmakhanov, O. Yeskhojayev, A. Vilkova, A. Shevtsov, R. Hewson & B. Atkinson

Public Health England, Research

Sample details

Collection date
2015
Earliest release date
2016-04-30
Sampling location
Kazakhstan (Maktaaral district)
Isolate name
tick pool #80

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2016-04-30
INSDC accession S

Host

Host

Submission details

Submission ID
KX096700.1.S
Submitting group
Date submitted
2026-10-26 16:18:33 UTC
Date released
2026-10-26 16:21:19 UTC

Lineage

Segment S Lineage
IV.2

Files

Annotations

Alignment and QC

Total SNPs S
70
Total ambiguous nucs S
3
Length S
501 (29.8%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T157C
  • C166T
  • C178A
  • T181C
  • T182C
  • T220C
  • G229A
  • C235T
  • C241T
  • C244T
  • A247G
  • T250A
  • G262A
  • A268C
  • G271A
  • T277C
  • T283C
  • T289C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:D116E
  • NP:T124A
  • NP:G125N
  • NP:N150H
Deletions
N/A
Insertions
N/A

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