This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S5ZB.1

China/LOC_000S5ZB.1/2016-12-31
L. Jianxiong, G. Tian, S. Yong & X. Ying

Jiangxi Province Center for Disease Control and Prevention

Sample details

Collection date
2016-12-31
Earliest release date
2018-03-18
Sampling location
China
Isolate name
JX3058/2014

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2018-03-18
NCBI update date
2018-03-18
INSDC accession

Host

Host

Submission details

Submission ID
KY885702.1
Submitting group
Date submitted
2026-06-30 19:59:15 UTC
Date released
2026-06-30 20:05:24 UTC

Clade

Clade CV-A10
C

Genotype

Genotype
CV-A10

Alignment and QC

Total SNPs
63
Length
271 (3.66%)

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions
  • T2592G
  • A2595T
  • T2604A
  • C2607T
  • T2610C
  • A2611T
  • A2628T
  • A2631G
  • G2634A
  • G2637T
  • C2643G
  • A2644G
  • G2646T
  • A2652G
  • A2658G
  • T2662C
  • G2667A
  • G2668A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY421767.1 reference

Substitutions

VP1

  • VP1:T59S
  • VP1:M70V
  • VP1:A78T
  • VP1:S81N
  • VP1:D101N
  • VP1:V107T
Deletions
N/A
Insertions
N/A

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