This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S5ZB.1

Namibia/LOC_000S5ZB.1/1987
M. Zivcec, L. Guerrero, C. Albarino, C. Spiropoulou, P. E. Rollin, T. G. Ksiazek, R. Swanepoel & S. T. Nichol

Centers for Disease Control and Prevention, Viral Special Pathogens Branch

Sample details

Collection date
1987
Earliest release date
2017-09-06
Sampling location
Namibia
Isolate name
SPU134_87_813049_M

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-14 12:59insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2017-09-06
INSDC accession M

Host

Host

Submission details

Submission ID
MF511235.1.M
Submitting group
Date submitted
2026-05-14 12:58:54 UTC
Date released
2026-05-14 13:08:58 UTC

Files

Annotations

Alignment and QC

Total SNPs M
270
Total deleted nucs M
1
Length M
5348 (99.7%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • C85T
  • T86C
  • A117G
  • C132T
  • A174G
  • A192G
  • C193T
  • C194T
  • A203G
  • C206T
  • C217T
  • C221T
  • C229A
  • T259C
  • C275T
  • A284G
  • C293T
  • C320T
Deletions

M

5170
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:I9V
  • GPC:R28G
  • GPC:T34V
  • GPC:P42L
  • GPC:P46Q
  • GPC:L56P
  • GPC:P80S
  • GPC:G85E
  • GPC:L87P
  • GPC:P88S
  • GPC:S90Q
  • GPC:E95D
  • GPC:V98A
  • GPC:G101S
  • GPC:T102I
  • GPC:L105S
  • GPC:G108S
  • GPC:P112S
Deletions
N/A
Insertions
N/A

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