This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.
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Loculus
Crimean-Congo Hemorrhagic Fever Virus
Crimean-Congo Hemorrhagic Fever Virus
Test Dummy Organism
Ebola Zaire
Test organism (without alignment)
West Nile Virus
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Status
LOC_000R4M4.1
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Display Name: Kazakhstan/LOC_000R4M4.1/2021-05-14
K.T. Sultankulova,
G.O. Shynybekova,
N.S. Kozhabergenov,
N.N. Mukhami,
O.V. Chervyakova,
Y.D. Burashev,
K.D. Zakarya,
A.K. Nakhanov,
K.B. Barakbayev,
M.B. Orynbayev
Submission details
Submission ID
ON783805.1.S
Submitter
insdc_ingest_user
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-09-19 17:23:46 UTC
Date released
2024-09-19 17:25:57 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-09-19 17:23
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
Authors
Author affiliations
Research Institute for Biological Safety Problems, Molecular Biology and Genetic Engineering
Alignment states and QC metrics S
Completeness S
29.13%
Length S
488
Total ambiguous nucs S
1
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
69
Total unknown nucs S
0
Sample details
Collection subdivision level 1
Zhalagash
Collection country
Kazakhstan
Collection date
2021-05-14
INSDC
INSDC accession S
ON783805.1
NCBI release date
2022-10-19
Nucleotide mutations
Substitutions
S
S:
T
157
C
S:
C
166
T
S:
C
178
A
S:
T
181
C
S:
T
182
C
S:
T
220
C
S:
G
229
A
S:
C
235
T
S:
C
241
T
S:
C
244
T
S:
A
247
G
S:
T
250
A
S:
G
262
A
S:
A
268
C
S:
G
271
A
S:
T
277
C
S:
T
283
C
S:
T
289
C
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Deletions
None
Insertions
None
Amino acid mutations
Substitutions
NP
NP:
D
116
E
NP:
T
124
A
NP:
G
125
N
NP:
N
150
H
Deletions
None
Insertions
None
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