This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q42B.1

Hungary/Psa_HU2018/2018-01-01
A. Nagy, E. Mezei, O. Nagy, T. Bakonyi, N. Csonka, M. Kaposi, A. Koroknai, K. Szomor, Z. Rigo, Z. Molnar, A. Danielisz & M. Takacs

National Public Health Center, Division of Virology

Sample details

Collection date
2018
Earliest release date
2019-04-03
Sampling location
Hungary
Isolate name
Psa_HU2018

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-22 14:38insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2019-04-03
NCBI update date
2019-04-03
INSDC accession

Host

Host

Submission details

Submission ID
MK224614.1
Submitting group
Date submitted
2026-05-22 14:37:53 UTC
Date released
2026-05-22 14:53:57 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
70
Length
369 (3.35%)
Amino Acid Mutations from founder clade
  • NS3:H249P
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • A5250C
  • G5255A
  • C5260T
  • A5265G
  • A5268G
  • C5271T
  • G5274A
  • A5277G
  • G5280A
  • A5283C
  • T5292C
  • G5295T
  • G5308T
  • A5313G
  • A5316C
  • G5328T
  • G5343A
  • A5346C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS3

  • NS3:R215K
  • NS3:A233S
  • NS3:N253S
  • NS3:V283I
  • NS3:S302A
  • NS3:S331A
Deletions
N/A
Insertions
N/A

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