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LOC_000Q3M7.1
Download
Download FASTA
Download metadata TSV
Yugoslavia/LOC_000Q3M7.1
D. Duh,
S. T. Nichol,
M. L. Khristova,
A. Saksida,
I. Hafner-Bratkovic,
M. Petrovec,
I. Dedushaj,
S. Ahmeti,
T. Avsic-Zupanc &
M. Khristova
Institute of Microbiology and Immunology, Virology
Sample details
Earliest release date
2008-03-28
Sampling location
Yugoslavia
Isolate name
Kosova Hoti
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2008-03-28
INSDC accession L
EU044832.1
INSDC accession M
EU037902.1
Host
Host
human (Homo sapiens)
Submission details
Submission ID
EU044832.1.L/EU037902.1.M
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-10-02 14:57:47 UTC
Date released
2026-10-02 14:58:43 UTC
Files
Annotations
LOC_000Q3M7.1.embl
Alignment and QC
Total SNPs M
1033
Total inserted nucs M
1
Total deleted nucs M
3
Length M
5364 (100%)
Total SNPs L
1291
Total inserted nucs L
42
Length L
12150 (100%)
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
L
G
23
T
A
35
G
A
42
T
G
43
C
T
49
C
A
53
G
T
58
A
C
59
T
C
63
T
C
64
G
T
66
C
A
72
G
A
73
T
A
91
G
G
93
A
C
100
T
A
109
G
A
124
G
Show more
M
T
40
C
G
50
A
A
51
G
A
61
T
T
67
C
T
68
C
A
69
G
T
71
A
G
76
C
A
80
G
T
83
C
G
84
A
C
85
T
T
86
C
C
92
T
T
100
C
T
102
C
C
103
T
Show more
Deletions
M
333-335
Insertions
L
ins_67:C, ins_11928:CG, ins_12092:CTATTCATACCAGTTTCATTATTTAAAGGGTGTGGGGGG
M
ins_5171:T
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
GPC
GPC:
I
3
T
GPC:
S
4
L
GPC:
M
6
V
GPC:
Y
7
C
GPC:
A
8
F
GPC:
C
11
Y
GPC:
C
15
L
GPC:
E
19
G
GPC:
T
20
A
GPC:
S
23
Q
GPC:
H
24
S
GPC:
E
26
A
GPC:
R
28
E
GPC:
K
31
G
GPC:
D
33
N
GPC:
M
35
T
GPC:
T
37
A
GPC:
D
40
T
Show more
RdRp
RdRp:
S
6
N
RdRp:
S
19
T
RdRp:
D
55
A
RdRp:
Y
60
N
RdRp:
R
63
H
RdRp:
S
67
L
RdRp:
R
80
K
RdRp:
M
172
V
RdRp:
R
174
K
RdRp:
I
176
M
RdRp:
A
202
V
RdRp:
S
205
P
RdRp:
N
206
Y
RdRp:
K
218
R
RdRp:
K
275
R
RdRp:
I
279
V
RdRp:
V
352
I
RdRp:
G
449
N
Show more
Deletions
GPC
GPC:77
Insertions
N/A
Nucleotide sequences
Reference-aligned nucleotide sequences
Reference-aligned amino acid sequences
L
M
S
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