This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q3M7.1

Display Name: LOC_000Q3M7.1
M. S. Oberste, K. Maher, A. J. Williams, N. Dybdahl-Sissoko, B. A. Brown, M. S. Gookin, S. Penaranda, N. Mishrik, M. Uddin & M. A. Pallansch

Sample details

Collection date (upper bound)
2005-12-25
Earliest release date
2005-12-25
Isolate name
10475

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-01-18 23:20insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Centers for Disease Control and Prevention, Respiratory and Enteric Virus Branch

INSDC

NCBI release date
2005-12-25
NCBI update date
2005-12-29
INSDC accession

Alignment and QC metrics

Length
291
Total SNPs
72
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
3.93%
Total stop codons
0

Submission details

Submission ID
AY919459.1
Submitting group
Date submitted
2026-01-18 23:19:45 UTC
Date released
2026-01-18 23:22:53 UTC

Genotype

Genotype
CV-A10

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions

  • C2598G
  • T2601G
  • T2604C
  • C2607T
  • T2610C
  • A2628C
  • A2631G
  • G2634T
  • G2637C
  • C2643G
  • A2644G
  • G2646T
  • C2649T
  • A2658G
  • G2664A
  • G2667A
  • G2668A
  • G2670C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the AY421767.1 reference

    Substitutions

    VP1

  • VP1:M70V
  • VP1:A78T
  • VP1:S81N
  • VP1:D101G
  • VP1:V107T
  • VP1:A145V
  • VP1:F148Y
    • Deletions
    None
    Insertions
    None

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