This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q3M7.1

Display Name: LOC_000Q3M7.1
H. Ishiko, Y. Shimada, M. Yonaha, O. Hashimoto, A. Hayashi, K. Sakae & N. Takeda

Sample details

Collection date (upper bound)
2002-04-19
Earliest release date
2002-04-19
Isolate name
Kanagawa/51/95

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-05 09:17insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Hiroaki Ishiko, Mitsubishi Kagaku Bio-Clinical Laboratories, Inc., Infectious Disease Laboratory; Shimura 3-30-1, Itabashi-ku, Tokyo 174-8555

INSDC

NCBI release date
2002-04-19
NCBI update date
2016-07-26
INSDC accession

Alignment and QC metrics

Length
207
Total SNPs
40
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
2.79%
Total stop codons
0

Submission details

Submission ID
AB061505.1
Submitting group
Date submitted
2026-02-05 09:16:53 UTC
Date released
2026-02-05 09:17:52 UTC

Clade

Clade CV-A16
B1c

Genotype

Genotype
CV-A16

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions

  • A768C
  • C771T
  • A774G
  • G780C
  • T783G
  • C786A
  • C789T
  • A792G
  • T795C
  • G798A
  • C801T
  • A804T
  • A810G
  • A816C
  • T819G
  • T822C
  • A825T
  • C828T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U05876.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue