This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q3FL.1

Egypt/LOC_000Q3FL.1/2021-01-01_TO_2021-08-01
F. Rasslan, H. A. Bendary, A. M. Zaki & A. K. Abdulall

Faculty of Pharmacy (Girls), Al-Azhar University, Microbiology and Immunology

Sample details

Collection date
2021-01-01/2021-08-01
Earliest release date
2021-08-01
Sampling location
Egypt
Isolate name
20

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2021-08-01
INSDC accession S

Host

Host

Submission details

Submission ID
MZ322095.1.S
Submitting group
Date submitted
2026-08-05 15:16:42 UTC
Date released
2026-08-05 15:20:38 UTC

Lineage

Segment S Lineage
I

Files

Annotations

Alignment and QC

Total SNPs S
52
Length S
248 (14.8%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T313A
  • C316T
  • T319A
  • A322G
  • A327G
  • G328A
  • A331C
  • T334C
  • A337G
  • C343T
  • G346A
  • T352C
  • G353A
  • G367A
  • C370T
  • A379G
  • T382C
  • T385C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:K91R
  • NP:A100T
  • NP:T124A
  • NP:G125N
  • NP:A154S
Deletions
N/A
Insertions
N/A

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