This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q3AW.1

USA/LOC_000Q3AW.1
L. Tallon, L. Sadzewicz, K. Vavikolanu, A. Mehta, J. Aluvathingal, S. Nadendla, T. Myers, Y. Yan & H. Sichtig

US Food and Drug Administration, Center for Devices and Radiological Health

Sample details

Earliest release date
2022-07-30
Sampling location
USA (MD)
Isolate name
IbAr10200

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-03 15:47insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2022-07-30
INSDC accession S
BioProject accession
BioSample accession
Raw reads accession

Submission details

Submission ID
OK573220.1.S
Submitting group
Date submitted
2026-06-03 15:47:14 UTC
Date released
2026-06-03 15:51:13 UTC

Lineage

Segment S Lineage
III

Files

Annotations

Alignment and QC

Total SNPs S
8
Total inserted nucs S
30
Total deleted nucs S
43
Length S
1616 (97.4%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • A44T
  • A96G
  • A98C
  • G789A
  • G1661A
  • A1670T
  • G1671T
  • A1672G
Deletions

S

50-92
Insertions

S

ins_1672:AGAATAGACTTAGTGTGTCCAGATCCTTGG

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:N14S
  • NP:G245E
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue