This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q3AW.1

China/LOC_000Q3AW.1/2021
M. M. Chen, H. F. Chen & M. Chen

Guangxi Zhuang Autonomous Region Center for Disease Control and Prevention, Pathogenic Microorganism Laboratory

Sample details

Collection date
2021
Earliest release date
2025-04-16
Sampling location
China (Hezhou)
Isolate name
CVA16_B1a_21HZ051

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-14 11:41insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-04-16
NCBI update date
2025-04-16
INSDC accession

Host

Host

Submission details

Submission ID
PV467033.1
Submitting group
Date submitted
2026-04-14 11:41:36 UTC
Date released
2026-04-14 12:21:19 UTC

Clade

Clade CV-A16
B1c

Genotype

Genotype
CV-A16

Alignment and QC

Total SNPs
216
Length
891 (12%)
Variant
False

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions

  • T2448G
  • G2452C
  • G2453C
  • A2454C
  • A2460T
  • T2469C
  • G2475A
  • G2476A
  • C2481G
  • C2483A
  • T2485A
  • C2486A
  • G2489A
  • T2493G
  • G2494A
  • G2495A
  • T2496C
  • T2499C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U05876.1 reference

Substitutions

VP1

  • VP1:G3P
  • VP1:A11T
  • VP1:T13N
  • VP1:S14N
  • VP1:R15Q
  • VP1:G17N
  • VP1:A19S
  • VP1:S22A
  • VP1:E26L
  • VP1:N33E
  • VP1:E36S
  • VP1:L43V
  • VP1:Q59S
  • VP1:E61K
  • VP1:T79A
  • VP1:M119L
  • VP1:A139V
  • VP1:N143T
Deletions
N/A
Insertions
N/A

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