This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q3AW.1

China/LOC_000Q3AW.1/2010-12
J. Li, T. Gong, Y. Shi & Y. Xiong

Jiangxi Province Center for Disease Control and Prevention

Sample details

Collection date
2010-12
Earliest release date
2018-03-27
Sampling location
China (Jiangxi)
Isolate name
CA16/JX/1248/2010

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-24 17:59insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2018-03-27
NCBI update date
2018-03-27
INSDC accession

Host

Host

Submission details

Submission ID
KY913342.1
Submitting group
Date submitted
2026-06-24 17:58:47 UTC
Date released
2026-06-24 18:05:24 UTC

Clade

Clade CV-A16
B1c

Genotype

Genotype
CV-A16

Alignment and QC

Total SNPs
114
Length
478 (6.45%)

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions
  • A2520G
  • G2521T
  • A2522T
  • C2529G
  • C2532T
  • C2538T
  • C2541T
  • A2542G
  • T2544A
  • T2547A
  • G2551A
  • A2552G
  • G2553T
  • G2562A
  • C2568T
  • G2571T
  • C2572G
  • C2574T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U05876.1 reference

Substitutions

VP1

  • VP1:E26L
  • VP1:N33E
  • VP1:E36S
  • VP1:L43V
  • VP1:Q59S
  • VP1:E61K
  • VP1:T79A
  • VP1:M119L
  • VP1:A139V
  • VP1:I179V
  • VP1:L183M
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue