This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q281.1

Uganda/LOC_000Q281.1
J. Chamberlain, N. Cook, G. Lloyd, V. Mioulet, H. Tolley & R. Hewson

Centre for Emergency Preparedness and Response, Health Protection Agency Porton Down, Novel & Dangerous Pathogens

Sample details

Earliest release date
2005-11-23
Sampling location
Uganda
Isolate name
SPU128/81/7

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2005-11-23
INSDC accession S

Submission details

Submission ID
DQ076415.1.S
Submitting group
Date submitted
2026-11-06 16:58:19 UTC
Date released
2026-11-06 16:59:20 UTC

Lineage

Segment S Lineage
III

Files

Annotations

Alignment and QC

Total SNPs S
115
Total inserted nucs S
1
Total deleted nucs S
2
Length S
1671 (100%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • A30C
  • G67A
  • C70T
  • G86C
  • G99A
  • C166T
  • C178A
  • G189A
  • T199C
  • G202A
  • G229A
  • C235T
  • A247G
  • G256A
  • G271A
  • C295T
  • A322G
  • A325G
Deletions

S

54, 1633
Insertions

S

ins_1577:A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:D11H
  • NP:R15K
  • NP:R45K
  • NP:K91R
  • NP:T124A
  • NP:G125N
  • NP:L179Q
  • NP:H195R
  • NP:I246V
  • NP:A256V
  • NP:S301G
  • NP:K428R
  • NP:V436I
Deletions
N/A
Insertions
N/A

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