This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q281.1

Democratic_Republic_of_the_Congo/LOC_000Q281.1
J. Chamberlain, H. Tolley, V. Mioulet, N. Cook & R. Hewson

Centre for Emergency Preparedness and Response, Health Protection Agency # Porton Down, Novel & Dangerous Pathogens

Sample details

Earliest release date
2006-08-01
Sampling location
Democratic Republic of the Congo
Isolate name
Congo 3010

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2006-08-01
INSDC accession S

Submission details

Submission ID
DQ144418.1.S
Submitting group
Date submitted
2026-10-19 10:19:24 UTC
Date released
2026-10-19 10:19:59 UTC

Lineage

Segment S Lineage
II

Files

Annotations

Alignment and QC

Total SNPs S
260
Total deleted nucs S
32
Length S
1640 (100%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T39A
  • A50G
  • G54A
  • A61G
  • C64T
  • G67A
  • A78C
  • T79C
  • A81G
  • A85G
  • A118G
  • A121G
  • G122A
  • A124T
  • C154T
  • T157C
  • C166T
  • T175C
Deletions

S

1539-1553, 1608-1624
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:N8T
  • NP:N9S
  • NP:G23S
  • NP:D116G
  • NP:T124A
  • NP:G125N
  • NP:H195R
  • NP:D199E
  • NP:I246V
  • NP:A256D
  • NP:R270K
  • NP:S275G
  • NP:I277V
  • NP:S301G
  • NP:A307P
  • NP:Y311F
  • NP:T320S
  • NP:Q370E
  • NP:V436I
Deletions
N/A
Insertions
N/A

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