This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q257.1

LOC_000Q257.1
H. Norder, L. Bjerregaard, L. Magnius, B. Lina, M. Aymard, J. J. Chomel, L. O. Magnius & J.-J. Chomel

Swedish Institute for Infectious Disease Control, Virological Department

Sample details

Earliest release date
2003-03-05
Isolate name
97/15229-29/99

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2003-03-05
NCBI update date
2016-07-25
INSDC accession

Submission details

Submission ID
AY208100.1
Submitting group
Date submitted
2026-09-27 20:55:41 UTC
Date released
2026-09-27 20:57:13 UTC

Clade

Clade EV-A71
C2

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
91
Length
546 (7.37%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • G2441A
  • C2444T
  • A2447G
  • G2465C
  • C2468T
  • A2477G
  • T2480C
  • G2482A
  • T2489C
  • A2491T
  • G2492A
  • C2503G
  • T2508C
  • T2513G
  • C2519T
  • C2527A
  • G2529A
  • C2531T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:E9D
  • VP1:S15N
  • VP1:K18I
  • VP1:P22R
  • VP1:P30Q
  • VP1:D31N
  • VP1:S35C
  • VP1:R67P
  • VP1:L97F
  • VP1:K98E
  • VP1:T114P
  • VP1:R145E
  • VP1:D167E
  • VP1:P172Q
Deletions
N/A
Insertions
N/A

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