This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q22D.1

Turkey/LOC_000Q22D.1/2005
A. Ozdarendeli, K. Aydin, S. Tonbak, M. Aktas, K. Altay, I. Koksal, Y. Bolat, N. Dumanli & A. Kalkan

Firat University, Virology

Sample details

Collection date
2005
Earliest release date
2007-01-29
Sampling location
Turkey
Isolate name
Kelkit/Turkey-HM3/2005

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2007-01-29
INSDC accession M segment

Host

Host

Submission details

Submission ID
EF189749.1.M
Submitting group
Date submitted
2026-09-04 15:29:37 UTC
Date released
2026-09-04 15:31:04 UTC

Clade & Lineage

Closest reference M segment
M (MH396653.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs M segment
65
Length M segment
417 (7.64%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

M segment

  • C4648T
  • A4660G
  • T4672C
  • A4685G
  • A4690T
  • A4709G
  • G4714A
  • C4720T
  • A4723G
  • A4726G
  • T4738A
  • T4739C
  • G4741A
  • C4744T
  • A4747G
  • T4750C
  • G4753A
  • T4759G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & MH396653.1 references

Substitutions

GPC

  • GPC:K1533E
  • GPC:E1534D
  • GPC:N1541D
  • GPC:N1564D
  • GPC:G1590S
  • GPC:I1591V
  • GPC:V1595L
  • GPC:F1600L
  • GPC:T1601L
  • GPC:T1604A
  • GPC:I1607V
  • GPC:I1610V
  • GPC:R1618K
  • GPC:K1648R
  • GPC:N1655S
Deletions
N/A
Insertions
N/A

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