This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PZLF.1

Brazil/LOC_000PZLF.1/2020-08-21
E. A. Costa, M. Giovanetti, V. S. Fonseca, F. F. Aburjaile, J. Xavier, L. Catenacci, T. Adelino, F. C. M. Iani, W. Dumon, K. Deforche, J. Lourenco, T. De Oliveira & L. C. J. Alcantara

Fundacao Oswaldo Cruz, Laboratorio de Flavivirus

Sample details

Collection date
2020-08-21
Earliest release date
2022-05-08
Sampling location
Brazil (Piaui)
Isolate name
E66CaprichoPI

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-21 14:54insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2022-05-08
NCBI update date
2022-05-08
INSDC accession

Host

Host

Submission details

Submission ID
MW420987.1
Submitting group
Date submitted
2026-02-21 14:54:02 UTC
Date released
2026-02-21 15:15:14 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
10
Length
10960 (99.4%)

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • T247C
  • A630G
  • C1465T
  • C4107T
  • G5280A
  • C5612T
  • T6405C
  • C7287T
  • T8235C
  • C10338T
    • Deletions
    N/A
    Insertions
    N/A

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    NS3

  • NS3:S334F

    • env

  • env:L167F
    • Deletions
    N/A
    Insertions
    N/A

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