This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PZLF.1

South_Africa/LOC_000PZLF.1
F. J. Burt & R. Swanepoel

National Institute for Communicable Diseases, Special Pathogens Unit

Sample details

Earliest release date
2005-06-01
Sampling location
South Africa
Isolate name
spu94/85

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2005-06-01
INSDC accession S

Submission details

Submission ID
AY905626.1.S
Submitting group
Date submitted
2026-10-02 14:57:47 UTC
Date released
2026-10-02 14:58:43 UTC

Lineage

Segment S Lineage
II

Files

Annotations

Alignment and QC

Total SNPs S
62
Length S
450 (26.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • C187T
  • G196A
  • T199C
  • C214A
  • G229A
  • C235T
  • C244T
  • G256A
  • A268T
  • T274C
  • T289C
  • C295T
  • T304C
  • T313C
  • T319A
  • A322C
  • A325G
  • A331C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:D116G
  • NP:T124A
  • NP:G125N
Deletions
N/A
Insertions
N/A

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