This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PZLF.1

Turkey/LOC_000PZLF.1/2021
A. T. Kalaycioglu, T. C. Oguzoglu, O. Ari, R. Durmaz, A. Engin, M. Bakir, E. Erdem & T. Dal

Karadeniz Technical University, Faculty of Pharmacy Department of Pharmaceutical Microbiology

Sample details

Collection date
2021
Earliest release date
2023-02-21
Sampling location
Turkey
Isolate name
TR-SIVAS-C2M-2021

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-27 15:36insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2023-02-21
INSDC accession L

Submission details

Submission ID
ON640910.1.L
Submitting group
Date submitted
2026-02-27 15:36:26 UTC
Date released
2026-02-27 15:40:27 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs L
866
Length L
8430 (69.6%)
Variant L
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 reference

Substitutions

L segment

  • T3505C
  • G3523A
  • T3529C
  • G3568A
  • C3571T
  • C3572T
  • A3583G
  • C3586T
  • T3589G
  • C3595T
  • T3607C
  • G3628A
  • A3630G
  • T3646C
  • G3652A
  • G3676A
  • A3679G
  • A3685T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3 reference

Substitutions

RdRp

  • RdRp:D1171E
  • RdRp:K1185R
  • RdRp:R1212K
  • RdRp:V1228I
  • RdRp:K1282M
  • RdRp:V1317I
  • RdRp:I1363V
  • RdRp:N1367D
  • RdRp:L1386I
  • RdRp:S1436N
  • RdRp:S1454A
  • RdRp:R1456K
  • RdRp:I1458L
  • RdRp:R1478K
  • RdRp:V1495I
  • RdRp:V1577I
  • RdRp:V1601I
  • RdRp:K1656R
Deletions
N/A
Insertions
N/A

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