This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PZLF.1

Turkey/LOC_000PZLF.1/2021
A. T. Kalaycioglu, T. C. Oguzoglu, O. Ari, R. Durmaz, A. Engin & M. Bakir

Karadeniz Technical University, Faculty of Pharmacy Department of Pharmaceutical Microbiology

Sample details

Collection date
2021
Earliest release date
2023-02-20
Sampling location
Turkey
Isolate name
TR-SIVAS-C3M-2021

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-05 14:14insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2023-02-20
INSDC accession L

Submission details

Submission ID
ON623086.1.L
Submitting group
Date submitted
2026-03-05 14:14:28 UTC
Date released
2026-03-05 14:20:25 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs L
888
Length L
8429 (69.6%)
Variant L
True

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

L

  • T3505C
  • G3523A
  • T3529C
  • T3565G
  • G3568A
  • C3571T
  • C3572T
  • A3583G
  • C3586T
  • C3595T
  • T3607C
  • T3625C
  • A3631G
  • T3646C
  • G3652A
  • G3676A
  • A3679G
  • A3685T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

RdRp

  • RdRp:D1163E
  • RdRp:R1212K
  • RdRp:G1214S
  • RdRp:V1228I
  • RdRp:S1266A
  • RdRp:K1272R
  • RdRp:V1317I
  • RdRp:N1367D
  • RdRp:L1386I
  • RdRp:V1415I
  • RdRp:S1436N
  • RdRp:S1454A
  • RdRp:R1456K
  • RdRp:I1458L
  • RdRp:R1478K
  • RdRp:V1495I
  • RdRp:V1577I
  • RdRp:V1601I
Deletions
N/A
Insertions
N/A

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