This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PZLF.1

LOC_000PZLF.1
D. Cheon, H. Cho, J. Yoon, Y. Jee, K. Kim, K. Park, E.-C. Kim, H.-J. Chung, J.-H. Lee, J.-Y. Hong & P. Mcminn

National Institute of Health, Department of Virology

Sample details

Earliest release date
2002-09-03
Isolate name
KOR-EV71-13

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2002-09-03
NCBI update date
2016-07-24
INSDC accession

Submission details

Submission ID
AY125976.1
Submitting group
Date submitted
2026-09-25 12:48:14 UTC
Date released
2026-09-25 12:50:11 UTC

Clade

Clade EV-A71
C3

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
171
Length
891 (12%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • G2440C
  • G2441A
  • C2444T
  • A2447G
  • C2468T
  • T2471C
  • A2477G
  • T2489C
  • A2491G
  • G2492A
  • C2503A
  • T2508C
  • T2513A
  • C2527A
  • A2528G
  • G2529A
  • C2534A
  • A2537G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:G1A
  • VP1:K18R
  • VP1:P22Q
  • VP1:P30Q
  • VP1:D31N
  • VP1:R145E
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S240T
  • VP1:E244K
  • VP1:S246P
  • VP1:I262V
  • VP1:S275A
  • VP1:D282N
  • VP1:T289A
Deletions
N/A
Insertions
N/A

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