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LOC_000PZLF.1
Download
Download FASTA
Download metadata TSV
Australia/LOC_000PZLF.1/2010-09-13
S. Sadeghipour,
E. J. Bek &
P. C. McMinn
Sydney Medical School, The University of Sydney, Australia, Infectious Diseases and Immunology
Sample details
Collection date
2010-09-13
Earliest release date
2012-07-30
Sampling location
Australia
Isolate name
26M/AUS/4/99/GuaR1
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2012-07-30
NCBI update date
2012-10-12
INSDC accession
JQ950555.1
Host
Host
human (Homo sapiens)
Is lab host
True
Submission details
Submission ID
JQ950555.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-09-09 16:34:11 UTC
Date released
2026-09-09 16:37:44 UTC
Clade
Clade EV-A71
B3
Genotype
Genotype
EV-A71
Alignment and QC
Total SNPs
1365
Length
6582 (88.8%)
Nucleotide mutations
Mutations called relative to the
U22521.1
reference
Substitutions
C
752
A
G
755
A
C
758
G
C
761
T
A
764
T
G
779
C
T
782
C
T
788
C
C
794
T
C
800
T
C
812
T
T
815
C
A
818
T
A
827
T
T
833
C
T
836
C
C
839
T
G
851
C
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
U22521.1
reference
Substitutions
2A
2A:
T
26
N
2A:
N
57
D
2A:
R
68
K
2A:
V
82
I
2A:
F
83
Y
2A:
E
102
A
2A:
S
129
N
2B
2B:
R
11
D
2B:
V
47
I
2B:
S
85
A
2B:
M
95
I
2C
2C:
F
22
S
2C:
N
23
S
2C:
K
41
R
2C:
V
60
I
2C:
I
81
S
2C:
I
127
V
2C:
R
151
H
2C:
A
173
T
2C:
M
193
L
2C:
V
200
I
2C:
A
224
S
2C:
T
271
S
3A
3A:
E
39
D
3B
3B:
P
9
Q
3C
3C:
A
18
V
3C:
I
36
V
3C:
I
54
V
3C:
V
56
I
3C:
V
75
I
3C:
C
89
F
3C:
V
93
S
3C:
T
95
S
3C:
G
96
V
3C:
I
109
M
3C:
P
144
A
3C:
I
157
V
3C:
A
169
G
3D
3D:
M
6
V
3D:
R
10
K
3D:
T
44
H
3D:
H
68
Y
3D:
V
74
I
3D:
T
75
K
3D:
Q
76
E
3D:
N
91
D
3D:
K
94
Q
3D:
Y
106
N
3D:
P
133
S
3D:
V
134
T
3D:
T
138
V
3D:
R
140
K
3D:
L
143
F
3D:
N
154
Y
3D:
S
163
R
3D:
L
165
I
Show more
VP1
VP1:
K
18
R
VP1:
P
22
Q
VP1:
P
30
Q
VP1:
D
31
N
VP1:
K
43
E
VP1:
A
58
T
VP1:
D
94
N
VP1:
K
98
E
VP1:
R
145
G
VP1:
D
164
E
VP1:
D
167
E
VP1:
P
172
Q
VP1:
S
183
L
VP1:
S
184
T
VP1:
T
237
N
VP1:
E
244
K
VP1:
S
246
P
VP1:
I
249
V
VP1:
S
275
A
VP1:
D
282
N
VP2
VP2:
N
45
D
VP2:
P
94
Q
VP2:
V
126
I
VP2:
N
143
D
VP3
VP3:
L
6
P
VP3:
A
62
D
VP3:
D
234
H
VP3:
E
237
Q
VP3:
T
240
S
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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