This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PGTJ.1

Display Name: LOC_000PGTJ.1
J. R. Wang, Y. C. Tuan, H. P. Tsai, J. J. Yan, C. C. Liu & I. J. Su

Sample details

Collection date (upper bound)
2002-01-16
Earliest release date
2002-01-16
Isolate name
M0167-TW-00

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-13 18:06insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
National Cheng Kung University, Medical Technology

INSDC

NCBI release date
2002-01-16
NCBI update date
2002-01-16
INSDC accession

Alignment and QC metrics

Length
650
Total SNPs
82
Total inserted nucs
7
Total deleted nucs
6
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
8.76%
Total stop codons
0

Submission details

Submission ID
AY055171.1
Submitting group
Date submitted
2026-02-13 18:05:58 UTC
Date released
2026-02-13 18:07:49 UTC

Clade

Clade EV-A71
B4

Genotype

Genotype
EV-A71

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C97A
  • C120T
  • G121A
  • T135C
  • T138C
  • T142C
  • G143A
  • A146G
  • A148G
  • T149C
  • T155C
  • C156T
  • G157A
  • C158T
  • A159G
  • A180T
  • A188G
  • C190T
    • Deletions
    100-102, 693, 728, 729
    Insertions
    ins_123:C, ins_128:CT, ins_135:C, ins_703:A, ins_716:CT

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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