This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFWD.1

Display Name: LOC_000PFWD.1
Sanchez, A.; Trappier, S.; Nichol, S. T.

Submission details

Submission ID
U23458.1
Submitting group
Date submitted
2025-05-08 15:58:25 UTC
Date released
2025-05-08 15:58:44 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-05-08 15:58insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Anthony Sanchez, Special Pathogens Branch, Division of Viral and Rickettsial Diseases, Centers for Disease Control and Prevention, 1600 Clifton Road, Bldg. 15, Room SB611, Mail Stop G14, Atlanta, GA 30333

Alignment and QC metrics

Completeness
37.29%
Length
7038
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
301
Total unknown nucs
0

Sample details

Earliest release date
1995-10-26
Collection date (upper bound)
1995-10-26

INSDC

INSDC accession
NCBI release date
1995-10-26
NCBI update date
2002-08-28

Nucleotide mutations

Mutations called relative to the NC_002549.1 reference

Substitutions

  • G11490T
  • A11491G
  • G11493A
  • T11531C
  • T11588C
  • C11591T
  • T11624C
  • T11630G
  • A11662G
  • G11663A
  • T11672C
  • A11675G
  • A11706G
  • T11708C
  • T11726C
  • C11759T
  • G11771A
  • T11806C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_002549.1 reference

    Substitutions

    L

  • L:K43R
  • L:T58A
  • L:V91A
  • L:A157S
  • L:T203S
  • L:N273D
  • L:K294Q
  • L:K804P
  • L:C858S
  • L:I954V
  • L:P1095S
  • L:K1105R
  • L:D1124G
  • L:N1349D
  • L:D1383E
  • L:I1577V
  • L:S1585P
  • L:T1602I
    • Deletions
    None
    Insertions
    None

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