This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFJ3.1

Iran/LOC_000PFJ3.1/2010-05
K. Majidzadeh, M. Soleimani, A. Morovvati, A. G. Langeroudi, A. Ghalyanchi Langrodi & J. Razmyar

AJA University of Medical Science, Tasnim Biotechnology Research Center

Sample details

Collection date
2010-05
Earliest release date
2011-05-23
Sampling location
Iran
Isolate name
59/2010

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2011-05-23
INSDC accession S

Host

Host

Submission details

Submission ID
JF798868.1.S
Submitting group
Date submitted
2026-09-16 16:14:06 UTC
Date released
2026-09-16 16:15:46 UTC

Lineage

Segment S Lineage
V

Files

Annotations

Alignment and QC

Total SNPs S
39
Length S
222 (13.3%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • A268C
  • T274C
  • T283C
  • G292A
  • C295T
  • A298T
  • T304C
  • C310T
  • A322G
  • A325G
  • A331G
  • A337G
  • G346A
  • A347C
  • A349G
  • G353T
  • T364C
  • G367A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:K98Q
  • NP:A100S
  • NP:S109N
  • NP:T124A
  • NP:G125N
Deletions
N/A
Insertions
N/A

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