This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFJ3.1

Bulgaria/LOC_000PFJ3.1/2014
E. Panayotova, A. Papa, I. Trifonova & I. Christova

Aristotle University of Thessaloniki, Dept. of Microbiology

Sample details

Collection date
2014
Earliest release date
2016-07-18
Sampling location
Bulgaria
Isolate name
Kardzhali-tick3/2014

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2016-07-18
INSDC accession S

Host

Host

Submission details

Submission ID
KX227372.1.S
Submitting group
Date submitted
2026-09-22 14:58:16 UTC
Date released
2026-09-22 15:01:45 UTC

Lineage

Segment S Lineage
V

Files

Annotations

Alignment and QC

Total SNPs S
38
Length S
220 (13.2%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • C310T
  • A322G
  • A325G
  • A331G
  • A337G
  • C343T
  • A349G
  • G353T
  • T364C
  • G367A
  • C370T
  • A379G
  • G381A
  • T382C
  • A386G
  • A394G
  • C400T
  • C403T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:T124A
  • NP:G125N
Deletions
N/A
Insertions
N/A

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