This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFJ3.1

Romania/LOC_000PFJ3.1/2015-08-19
S. Dinu

Molecular Epidemiology, Cantacuzino National Institute of Research, Splaiul Indepedentei, 103, Bucharest, N/A

Sample details

Collection date
2015-08-19
Earliest release date
2018-08-06
Sampling location
Romania
Isolate name
RO_mo68/2015

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2018-08-06
NCBI update date
2018-08-06
INSDC accession
BioProject accession

Host

Host

Submission details

Submission ID
LT903713.1
Submitting group
Date submitted
2026-07-21 10:32:00 UTC
Date released
2026-07-21 10:49:40 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
127
Length
627 (5.69%)
Amino Acid Mutations from founder clade
  • NS5:A587T
Variant
False

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • C9430A
  • C9432G
  • G9435A
  • T9438G
  • G9439A
  • T9441C
  • T9444C
  • A9447G
  • G9449A
  • C9453T
  • C9456G
  • T9462C
  • T9465C
  • C9471T
  • A9477G
  • G9486A
  • G9489A
  • T9492C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:A587T
  • NS5:R590K
  • NS5:T641G
  • NS5:V740I
Deletions
N/A
Insertions
N/A

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