This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFH5.1

Display Name: Taiwan/LOC_000PFH5.1
K. H. Lin, K. P. Hwang, G. M. Ke, C. F. Wang, L. Y. Ke, Y. T. Hsu, Y. C. Tung, P. Y. Chu, B. H. Chen, H. L. Chen, C. L. Kao, J. R. Wang, H. L. Eng, S. Y. Wang, L. C. Hsu & H. Y. Chen

Sample details

Collection date (upper bound)
2006-01-15
Earliest release date
2006-01-15
Collection country
Taiwan
Isolate name
109/01/TW

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-21 09:46insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Kaohsiung Medical University Hospital, Labooratory of Virology, Department of Clinical Laboratory

INSDC

NCBI release date
2006-01-15
INSDC accession EV-A71

Host

Host taxon id
Host name scientific
Homo sapiens
Is lab host
True

Alignment and QC metrics EV-A71

Length EV-A71
207
Total SNPs EV-A71
34
Total inserted nucs EV-A71
0
Total deleted nucs EV-A71
0
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
2.79%

Submission details

Submission ID
AY817060.1.EV-A71
Submitting group
Date submitted
2025-10-21 09:45:43 UTC
Date released
2025-10-21 09:51:40 UTC

Clade

Clade EV-A71
B4

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C752A
  • C758G
  • C761T
  • A764C
  • G779C
  • T782C
  • C794T
  • C800T
  • G803A
  • T815C
  • A818T
  • A827T
  • T833C
  • T836C
  • C839T
  • A845G
  • G851C
  • C860G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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