This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFH5.1

Display Name: LOC_000PFH5.1
M. J. Cardosa, D. Perera, B. A. Brown, D. Cheon, H. M. Chan, K. P. Chan, H. Cho & P. McMinn

Sample details

Collection date (upper bound)
2003-10-09
Earliest release date
2003-10-09
Isolate name
3799/SIN/98

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-23 13:28insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Institute of Health and Community Medicine

INSDC

NCBI release date
2003-10-09
INSDC accession EV-A71

Alignment and QC metrics EV-A71

Length EV-A71
207
Total SNPs EV-A71
34
Total inserted nucs EV-A71
0
Total deleted nucs EV-A71
0
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
2.79%
Total stop codons EV-A71
0

Submission details

Submission ID
AY125985.1.EV-A71
Submitting group
Date submitted
2025-11-23 13:27:43 UTC
Date released
2025-11-23 13:32:25 UTC

Clade

Clade EV-A71
B3

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C752A
  • G755A
  • C758G
  • C761T
  • A764T
  • G779C
  • T782C
  • T788C
  • C794T
  • C800T
  • C812T
  • T815C
  • A818T
  • A827T
  • T833C
  • T836C
  • G851C
  • C860A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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