This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFAL.1

Turkey/LOC_000PFAL.1/2013
O. Unaldi, M. Yesilyurt, R. Durmaz & G. Korukluoglu

Public Health Institute of Turkey, Molecular Microbiology Research and Application Laboratory

Sample details

Collection date
2013
Earliest release date
2017-01-22
Sampling location
Turkey
Isolate name
Tekirdag-481-2013

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2017-01-22
INSDC accession M

Host

Host

Submission details

Submission ID
KX228865.1.M
Submitting group
Date submitted
2026-09-04 15:29:36 UTC
Date released
2026-09-04 15:32:38 UTC

Files

Annotations

Alignment and QC

Total SNPs M
116
Length M
779 (14.5%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • G1703A
  • T1706A
  • C1718T
  • G1720A
  • C1721T
  • C1736T
  • G1739A
  • C1745T
  • C1754T
  • C1766T
  • T1772C
  • C1781T
  • A1784G
  • A1799G
  • C1808T
  • T1820C
  • A1823G
  • G1828A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:G543D
  • GPC:R579K
  • GPC:N592T
  • GPC:V598T
  • GPC:Y606F
  • GPC:R609K
  • GPC:T633S
  • GPC:S634N
  • GPC:I637V
  • GPC:K669H
  • GPC:K688R
  • GPC:L707F
  • GPC:I711L
  • GPC:L714S
  • GPC:V718I
  • GPC:L725I
  • GPC:I778T
Deletions
N/A
Insertions
N/A

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