This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFAL.1

Iran/LOC_000PFAL.1/2016-05
M. Fazlalipour, V. Baniasadi, T. Jalali, Y. Jamshidi, T. Mohammadi, S. Azad-Manjiri, S. Khakifirouz & M. Salehi-Vaziri

Tehran University of Medical Sciences, Virology

Sample details

Collection date
2016-05
Earliest release date
2016-07-17
Sampling location
Iran
Isolate name
Iran-4878

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-07 17:09insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2016-07-17
INSDC accession S segment

Host

Host

Submission details

Submission ID
KX458023.1.S
Submitting group
Date submitted
2026-06-07 17:09:06 UTC
Date released
2026-06-07 17:12:04 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
74
Length S segment
504 (27.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T141C
  • C150T
  • G155A
  • T159A
  • T166C
  • C171T
  • A186G
  • T195C
  • C201T
  • A213G
  • C228T
  • G231A
  • T234G
  • G246A
  • A252C
  • A255G
  • T258C
  • T267C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:S39N
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:Q179L
  • NP:D199E
Deletions
N/A
Insertions
N/A

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