This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFAL.1

Turkey/LOC_000PFAL.1/2009
A. T. Kalaycioglu, R. Durmaz, A. Ozkul, O. Unaldi, Y. Uyar, G. Korukluoglu & M. Ertek

Refik Saydam National Public Health Agency, Molecular Microbiology Research and Application Laboratory

Sample details

Collection date
2009
Earliest release date
2011-09-19
Sampling location
Turkey
Isolate name
Corum 1945-09

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2011-09-19
INSDC accession M

Host

Host

Submission details

Submission ID
JF523541.1.M
Submitting group
Date submitted
2026-09-16 16:14:06 UTC
Date released
2026-09-16 16:15:46 UTC

Files

Annotations

Alignment and QC

Total SNPs M
92
Length M
593 (11.1%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • C1850T
  • T1853C
  • G1865A
  • A1867C
  • T1868C
  • A1874G
  • T1883C
  • G1884A
  • T1885C
  • C1886T
  • A1895G
  • T1896G
  • G1904A
  • A1909T
  • C1913T
  • C1914T
  • G1918A
  • T1925C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:N592T
  • GPC:V598T
  • GPC:C602G
  • GPC:Y606F
  • GPC:R609K
  • GPC:T633S
  • GPC:I637V
  • GPC:K669H
  • GPC:L694F
  • GPC:L707S
  • GPC:I711F
  • GPC:L714S
  • GPC:V718I
  • GPC:R724K
  • GPC:L725I
  • GPC:T742A
  • GPC:I778T
Deletions
N/A
Insertions
N/A

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