This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFAL.1

Turkey/LOC_000PFAL.1/2016-04-05
E. Dincer, A. Brinkmann, O. Hekimoglu, S. Hacioglu, K. Foldes, Z. Karapinar, P. F. Polat, B. Oguz, O. Orunc Kilinc, P. Hagedorn, N. Ozer, A. Ozkul, A. Nitsche & K. Ergunay

Hacettepe University Faculty of Medicine, Department of Medical Microbiology Virology Unit

Sample details

Collection date
2016-04-05
Earliest release date
2017-07-22
Sampling location
Turkey
Isolate name
ET36

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-26 15:42insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2017-07-22
INSDC accession L segment

Host

Host

Submission details

Submission ID
KY963540.1.L
Submitting group
Date submitted
2026-05-26 15:42:19 UTC
Date released
2026-05-26 15:45:23 UTC

Clade & Lineage

Closest reference L segment
singleReference (variant)

Files

Annotations

Alignment and QC

Total SNPs L segment
86
Length L segment
447 (3.69%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 reference

Substitutions

L segment

  • C6721T
  • A6724G
  • A6727G
  • A6730G
  • G6733T
  • A6736C
  • T6745C
  • G6748A
  • T6760A
  • A6763G
  • C6766T
  • A6772G
  • G6778A
  • A6784T
  • T6787C
  • G6790A
  • A6796G
  • A6799G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 reference

Substitutions

RdRp

  • RdRp:A2330T
Deletions
N/A
Insertions
N/A

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