This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFAL.1

Bulgaria/LOC_000PFAL.1/2014
E. Panayotova, A. Papa, I. Trifonova & I. Christova

Aristotle University of Thessaloniki, Dept. of Microbiology

Sample details

Collection date
2014
Earliest release date
2016-07-18
Sampling location
Bulgaria
Isolate name
Kardzhali-tickD1/2014

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2016-07-18
INSDC accession S

Host

Host

Submission details

Submission ID
KX227375.1.S
Submitting group
Date submitted
2026-09-14 15:44:56 UTC
Date released
2026-09-14 15:48:04 UTC

Lineage

Segment S Lineage
VI

Files

Annotations

Alignment and QC

Total SNPs S
93
Length S
474 (28.3%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • G190A
  • T198A
  • T199C
  • G202A
  • C214G
  • C217T
  • G229A
  • C244T
  • T253C
  • G256T
  • G259T
  • G262A
  • A265G
  • A268C
  • G271A
  • T274C
  • T283A
  • C295T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:F48Y
  • NP:A100T
  • NP:G101S
  • NP:V117I
  • NP:T124S
  • NP:G125S
  • NP:V141I
  • NP:A146T
  • NP:V163L
  • NP:M164V
  • NP:S165P
  • NP:L179I
  • NP:G185S
  • NP:V198I
  • NP:D199E
Deletions
N/A
Insertions
N/A

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