This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PFAL.1

Kazakhstan/LOC_000PFAL.1/2015
T. Nurmakhanov, Y. Sansyzbaev, P. Deryabin, B. Atshabar, O. Yeskhojayev, A. Vilkova, A. Shevtsov, R. Hewson & B. Atkinson

Public Health England, Research

Sample details

Collection date
2015
Earliest release date
2016-08-29
Sampling location
Kazakhstan (South Kazakhstan oblast)
Isolate name
SK/2015/human

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-03 15:47insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2016-08-29
INSDC accession M

Host

Host

Submission details

Submission ID
KX458183.1.M
Submitting group
Date submitted
2026-06-03 15:47:14 UTC
Date released
2026-06-03 15:51:13 UTC

Files

Annotations

Alignment and QC

Total SNPs M
621
Total inserted nucs M
1
Length M
5171 (96.3%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • A117G
  • C119T
  • C126T
  • A128G
  • G136A
  • G139A
  • A146G
  • A148G
  • G149A
  • C162A
  • A163G
  • A169G
  • A174G
  • G175A
  • T182C
  • G189A
  • A192G
  • C193T
Deletions
N/A
Insertions

M

ins_5168:G

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:I9V
  • GPC:C15Y
  • GPC:G16D
  • GPC:E19G
  • GPC:H24S
  • GPC:E26G
  • GPC:R28E
  • GPC:D33N
  • GPC:T34V
  • GPC:M35V
  • GPC:D40G
  • GPC:N41G
  • GPC:P42Q
  • GPC:S44P
  • GPC:P47L
  • GPC:A51T
  • GPC:S53P
  • GPC:P58S
Deletions
N/A
Insertions
N/A

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