This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PESN.1

Spain/LOC_000PESN.1/2011-11-20
A. Negredo, M. A. Habela, E. Ramirez de Arellano, F. Lasala, P. Lopez, A. Sarria, N. Labiod, R. Calero-Bernal, A. Tenorio, A. Estrada-Pena & P. Sanchez-Seco

National Center of Microbiology, Institute of Health Carlos III, Arbovirus and Imported Viral Diseases

Sample details

Collection date
2011-11-20
Earliest release date
2019-05-11
Sampling location
Spain
Isolate name
Caceres/A 2011

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-25 15:11insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2019-05-11
INSDC accession S

Submission details

Submission ID
MH337845.1.S
Submitting group
Date submitted
2026-03-25 15:11:29 UTC
Date released
2026-03-25 15:18:11 UTC

Host

Host

Lineage

Segment S Lineage
III

Files

Annotations

Alignment and QC

Total SNPs S
44
Length S
495 (29.6%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T157C
  • C178A
  • G189A
  • T199C
  • G202A
  • G229A
  • C235T
  • C244T
  • A247G
  • G271A
  • C295T
  • A298G
  • A322G
  • A327G
  • A337G
  • G346A
  • A355G
  • A358C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:R45K
  • NP:K91R
  • NP:T124A
  • NP:G125N
  • NP:L179Q
  • NP:H195R
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue