This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PDCJ.1

Netherlands/LOC_000PDCJ.1/1985
S. Van der Sanden, H. Van der Avoort & M. Koopmans

Virology; Antonie van Leeuwenhoeklaan 9, Bilthoven 3721 MA

Sample details

Collection date
1985
Earliest release date
2011-03-02
Sampling location
Netherlands
Isolate name
17001

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2011-03-02
NCBI update date
2016-07-25
INSDC accession

Submission details

Submission ID
AB524301.1
Submitting group
Date submitted
2026-08-18 18:16:28 UTC
Date released
2026-08-18 18:17:59 UTC

Clade

Clade EV-A71
B2

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
273
Length
1344 (18.1%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • A5939T
  • G5948A
  • A5952G
  • C5958T
  • G5965A
  • A5966G
  • C5972T
  • G5975T
  • G5978A
  • T5979C
  • G5981A
  • T5987C
  • T5993A
  • A5996G
  • C5999A
  • A6002C
  • C6009T
  • T6032C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

3D

  • 3D:M6V
  • 3D:P8S
  • 3D:R10K
  • 3D:N37K
  • 3D:P48S
  • 3D:T66V
  • 3D:T75H
  • 3D:S93K
  • 3D:E105D
  • 3D:Y106N
  • 3D:V134A
  • 3D:T138V
  • 3D:R140K
  • 3D:L143S
  • 3D:N154Y
  • 3D:S163R
  • 3D:R169K
  • 3D:E172K
Deletions
N/A
Insertions
N/A

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