This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PDCJ.1

Malaysia/LOC_000PDCJ.1/2000-05-03
K. L. Wee, I. C. Sam & Y. F. Chan

University Malaya, Department of Medical Microbiology, Faculty of Medicine

Sample details

Collection date
2000-05-03
Earliest release date
2012-08-31
Sampling location
Malaysia
Isolate name
PM-14200-00

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2012-08-31
NCBI update date
2016-07-25
INSDC accession

Host

Host

Submission details

Submission ID
JN215385.1
Submitting group
Date submitted
2026-10-01 16:14:07 UTC
Date released
2026-10-01 16:17:34 UTC

Clade

Clade CV-A16
B1c

Genotype

Genotype
CV-A16

Alignment and QC

Total SNPs
38
Length
207 (2.79%)

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions
  • A768C
  • C771T
  • G780C
  • T783G
  • C786A
  • C789T
  • A792G
  • T795C
  • G798A
  • A804T
  • A810G
  • A816C
  • T819A
  • T822C
  • C828T
  • C834A
  • C837T
  • C840A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U05876.1 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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