This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PD40.1

Iran/LOC_000PD40.1/2017-09
M. Fazlalipour, M. H. Pouriayevali, T. Jalali, T. Mohammadi, Z. Fereydouni, S. Azad-Manjiri, M. Hosseini, M. Tavakolirad, S. Azizizadeh, S. Khakifirouz, V. Baniasadi & M. Salehi-Vaziri

Tehran University of Medical Sciences, Virology

Sample details

Collection date
2017-09
Earliest release date
2018-10-02
Sampling location
Iran
Isolate name
Qeshm Island

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-13 15:41insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2018-10-02
INSDC accession S

Submission details

Submission ID
MG456911.1.S
Submitting group
Date submitted
2026-03-13 15:41:04 UTC
Date released
2026-03-13 15:48:31 UTC

Host

Host

Lineage

Segment S Lineage
IV.2

Files

annotations

Alignment and QC

Total SNPs S
53
Length S
404 (24.2%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • G256A
  • A268T
  • G271A
  • T277C
  • T283C
  • C295T
  • A298C
  • C316T
  • T334G
  • A337G
  • G346A
  • G367A
  • C370T
  • T382C
  • T385C
  • A394G
  • G397A
  • C400T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:D116E
  • NP:T124A
  • NP:G125N
  • NP:N150H
  • NP:H195R
  • NP:D199E
Deletions
N/A
Insertions
N/A

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