This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PD40.1

Albania/LOC_000PD40.1/2005
A. Papa, E. Velo, P. Kadiaj, K. Tsioka, A. Kontana, M. Kota & S. Bino

Aristotle University of Thessaloniki, A' Dept. of Microbiology

Sample details

Collection date
2005
Earliest release date
2017-09-02
Sampling location
Albania
Isolate name
ALB-24/2005

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-20 13:49insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2017-09-02
INSDC accession S segment

Host

Host

Submission details

Submission ID
MF612181.1.S
Submitting group
Date submitted
2026-04-20 13:49:12 UTC
Date released
2026-04-20 13:53:53 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
33
Length S segment
220 (12.2%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • C294T
  • A309G
  • A315G
  • A321G
  • A333G
  • G337T
  • G339A
  • C342A
  • T348C
  • G351A
  • A363G
  • G365A
  • T366C
  • A370G
  • A378G
  • A381G
  • C390T
  • A393C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:A100S
  • NP:S109N
  • NP:T111A
Deletions
N/A
Insertions
N/A

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