This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PC17.1

Turkey/LOC_000PC17.1/2014
F. Bayrakdar & D. Yagci Caglayik

Public Health Institution of Turkey, Virology

Sample details

Collection date
2014
Earliest release date
2015-12-09
Sampling location
Turkey
Isolate name
Turkey/Artova02/2014

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2015-12-09
INSDC accession M

Host

Host

Submission details

Submission ID
KT266844.1.M
Submitting group
Date submitted
2026-07-07 12:47:52 UTC
Date released
2026-07-07 12:49:42 UTC

Files

Annotations

Alignment and QC

Total SNPs M
86
Length M
519 (9.67%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • A4616G
  • T4619C
  • C4622T
  • G4625A
  • C4628T
  • T4634C
  • T4640C
  • C4644T
  • C4652T
  • T4661G
  • A4664G
  • C4671T
  • T4676C
  • A4694T
  • A4701C
  • A4713G
  • A4730G
  • A4736G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:H1527Y
  • GPC:E1534D
  • GPC:K1537Q
  • GPC:N1541D
  • GPC:S1564D
  • GPC:S1589G
  • GPC:G1590S
  • GPC:I1591V
  • GPC:V1595L
  • GPC:M1597I
  • GPC:F1600L
  • GPC:L1603I
  • GPC:I1607V
  • GPC:I1610V
  • GPC:R1618K
  • GPC:K1652R
  • GPC:N1655S
  • GPC:K1661R
  • GPC:E1666D
  • GPC:R1672K
Deletions
N/A
Insertions
N/A

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