This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PC17.1

Oman/LOC_000PC17.1/1998
M. Zivcec, M. G. Metcalfe, C. G. Albarino, L. W. Guerrero, S. D. Pegan, C. F. Spiropoulou, E. Bergeron & M. L. Khristova

Centers for Disease Control and Prevention, Viral Special Pathogens Branch

Sample details

Collection date
1998
Earliest release date
2015-12-23
Sampling location
Oman
Isolate name
Oman-199809166

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2015-12-23
INSDC accession M

Host

Host

Submission details

Submission ID
KR864901.1.M
Submitting group
Date submitted
2026-08-05 15:16:42 UTC
Date released
2026-08-05 15:18:44 UTC

Files

Annotations

Alignment and QC

Total SNPs M
1021
Total inserted nucs M
1
Total deleted nucs M
6
Length M
5361 (100%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • G50T
  • A51G
  • G56A
  • A57C
  • C66T
  • A70G
  • T71A
  • G76T
  • A80G
  • T83C
  • C85T
  • T86C
  • T91C
  • C92T
  • T98C
  • T100C
  • T102C
  • C103T
Deletions

M

317-322
Insertions

M

ins_5168:G

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:I3T
  • GPC:S4L
  • GPC:M6V
  • GPC:I9V
  • GPC:L10F
  • GPC:C15W
  • GPC:G16S
  • GPC:L17P
  • GPC:E19G
  • GPC:H21R
  • GPC:S23L
  • GPC:H24S
  • GPC:R28Q
  • GPC:K31E
  • GPC:D33G
  • GPC:T34I
  • GPC:M35T
  • GPC:T36R
Deletions

GPC

GPC:76, GPC:77
Insertions
N/A

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