This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PC17.1

Iran/LOC_000PC17.1/2014
P. Biglari, S. Chinikar, H. Belqeiszadeh, Z. Telmadarraiy, E. Mostafavi, M. Ghaffari, S. Javaherizadeh, N. Nowotny, A. R. Fooks & N. Shahhosseini

Bernhard Nocht Institute for Tropical Medicine

Sample details

Collection date
2014
Earliest release date
2016-09-24
Sampling location
Iran
Isolate name
Iran/IR-T5-HAN/2014

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-28 13:08insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2016-09-24
INSDC accession S segment

Host

Host

Submission details

Submission ID
KT931952.1.S
Submitting group
Date submitted
2026-05-28 13:08:14 UTC
Date released
2026-05-28 13:13:06 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
60
Length S segment
471 (26.1%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • C150T
  • G153A
  • T156C
  • T166C
  • A173G
  • G174A
  • G180A
  • A186G
  • C192T
  • C201T
  • G231A
  • A252C
  • T273C
  • G276A
  • G282C
  • T287C
  • G306T
  • A309G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:K45R
  • NP:V83A
  • NP:D116E
  • NP:A124S
  • NP:Q179L
Deletions
N/A
Insertions
N/A

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