This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PC17.1

Italy/LOC_000PC17.1/2019-08-24
M. Bisseux, A. Mirand, C. Henquell, J.-L. Bailly, E. Pariani, L. Pellegrinelli & S. Binda

University of Milano, Department of Biomedical Sciences for Health

Sample details

Collection date
2019-08-24
Earliest release date
2025-07-12
Sampling location
Italy
Isolate name
S12_MI07_C1_MIL_ITA_24_08_2019

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-11 19:32insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-07-12
NCBI update date
2025-07-12
INSDC accession

Host

Host

Submission details

Submission ID
PQ365576.1
Submitting group
Date submitted
2026-05-11 19:32:12 UTC
Date released
2026-05-11 19:59:01 UTC

Clade

Clade EV-A71
C1-like

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
46
Length
302 (4.08%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • T2618C
  • T2636A
  • T2648C
  • C2651T
  • A2669G
  • C2672T
  • C2675T
  • T2678C
  • C2690T
  • A2696G
  • A2699G
  • C2702G
  • T2720C
  • T2723C
  • A2730G
  • C2738A
  • C2741A
  • T2744C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K98E
  • VP1:R145E
  • VP1:F155Y
  • VP1:V156I
Deletions
N/A
Insertions
N/A

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