This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PBYD.1

India/LOC_000PBYD.1/2013
P. D. Yadav, A. M. Shete & D. T. Mourya

National Institute of Virology, Maximum Containment Laboratory

Sample details

Collection date
2013
Earliest release date
2017-09-06
Sampling location
India
Isolate name
NIV1310776

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-04 16:51insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2017-09-06
INSDC accession L segment

Submission details

Submission ID
KT384388.1.L
Submitting group
Date submitted
2026-06-04 16:51:08 UTC
Date released
2026-06-04 16:54:45 UTC

Clade & Lineage

Closest reference L segment
singleReference (variant)

Files

Annotations

Alignment and QC

Total SNPs L segment
146
Length L segment
1118 (9.23%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 reference

Substitutions

L segment

  • G6160A
  • G6163A
  • A6171G
  • C6173A
  • G6175T
  • T6176A
  • C6177T
  • A6178C
  • G6181A
  • C6182G
  • T6183C
  • A6190G
  • A6192G
  • G6193A
  • C6194G
  • A6195C
  • C6196A
  • T6199C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 reference

Substitutions

RdRp

  • RdRp:E2032G
  • RdRp:L2033I
  • RdRp:S2034I
  • RdRp:L2036A
  • RdRp:E2039G
  • RdRp:H2040A
  • RdRp:V2074I
  • RdRp:K2110R
  • RdRp:V2123I
  • RdRp:Q2127R
  • RdRp:K2128R
  • RdRp:I2134T
  • RdRp:V2148A
  • RdRp:S2197G
  • RdRp:A2330T
Deletions
N/A
Insertions
N/A

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