This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PBYD.1

Malaysia/LOC_000PBYD.1
M. J. Cardosa & E. L. Michael Gias

Cardosa M.J., Universiti Malaysia Sarawak, Institute Of Health And Community Medicine, IHCM, UNIMAS, Kota Samarahan, Kuching, 94300

Sample details

Earliest release date
1999-04-24
Sampling location
Malaysia

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-16 08:46insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
1999-04-24
NCBI update date
2016-07-26
INSDC accession

Host

Host

Submission details

Submission ID
AJ237944.1
Submitting group
Date submitted
2026-04-16 08:46:33 UTC
Date released
2026-04-16 08:49:01 UTC

Clade

Clade EV-A71
B3

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
75
Length
446 (6.02%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C2408T
  • G2412C
  • T2417A
  • G2420A
  • G2421C
  • A2423G
  • G2426A
  • A2430T
  • T2432C
  • A2438G
  • G2441A
  • C2444T
  • A2447G
  • T2462C
  • A2491G
  • G2492A
  • C2495A
  • C2498T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K18R
  • VP1:P22Q
  • VP1:P30Q
  • VP1:D31N
  • VP1:K43E
  • VP1:A58T
  • VP1:K98E

VP3

  • VP3:D234H
  • VP3:E237Q
  • VP3:T240S
Deletions
N/A
Insertions
N/A

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