This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PBYD.1

Italy/LOC_000PBYD.1/2015-01-01
F. Verna, P. Modesto, M. C. Radaelli, D. R. Francese, E. Monaci, R. Desiato, C. Grattarola, S. Peletto, A. Mosca, G. Savini, R. Chianese, M. Prearo, L. Chiavacci, V. Demicheli, C. Casalone & A. Pautasso

Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d'Aosta, Genetics and Immunobiochemistry

Sample details

Collection date
2015
Earliest release date
2017-04-22
Sampling location
Italy
Isolate name
Italy/2015/Vercelli_784

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2017-04-22
NCBI update date
2017-04-22
INSDC accession

Host

Host

Submission details

Submission ID
KU962944.1
Submitting group
Date submitted
2026-09-09 16:34:10 UTC
Date released
2026-09-09 16:48:32 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
70
Length
364 (3.3%)
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • G261A
  • A267T
  • T273C
  • C282T
  • A285T
  • A288G
  • T297C
  • C298A
  • T309C
  • G312C
  • A333G
  • C336T
  • T339C
  • C340T
  • T348C
  • G354A
  • G363A
  • C366T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

capsid

  • capsid:S100T
  • capsid:K108T
  • capsid:T109A
  • capsid:I111F
  • capsid:A112T
  • capsid:V113I
  • capsid:M114L
  • capsid:I115L
  • capsid:S120C
  • capsid:V121A

prM

  • prM:M44L
  • prM:D46E
Deletions
N/A
Insertions
N/A

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