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LOC_000PBYD.1
Download
Download FASTA
Download metadata TSV
Algeria/LOC_000PBYD.1/2009-06-05
M. Kautman,
G. Tiar,
A. Papa &
P. Siroky
University of Veterinary and Pharmaceutical Sciences Brno, Department of Biology and Wildlife Diseases
Sample details
Collection date
2009-06-05
Earliest release date
2016-03-29
Sampling location
Algeria (Aflou)
Isolate name
VFU-FVHE-DBWD-7521ALG
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-06-01 15:13
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2016-03-29
INSDC accession S segment
KT599098.1
Host
Host
hard ticks; hardbacked ticks; scale ticks (Hyalomma aegyptium)
Submission details
Submission ID
KT599098.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-06-01 15:13:21 UTC
Date released
2026-06-01 15:17:45 UTC
Clade & Lineage
Closest reference S segment
S11 (MK299338.1) (variant)
Files
Annotations
LOC_000PBYD.1.embl
Alignment and QC
Total SNPs S segment
29
Length S segment
313 (18.6%)
Nucleotide mutations
Mutations called relative to the
NC_005301.3
&
MK299338.1
references
Substitutions
S segment
C
360
T
G
366
A
T
375
C
A
393
G
T
408
C
A
420
G
C
429
T
T
441
A
T
447
C
T
474
C
A
483
T
G
492
A
A
495
G
T
496
C
G
507
A
T
531
A
G
534
A
A
558
G
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
&
MK299338.1
references
Substitutions
N/A
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L segment
S segment
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