This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PAFF.1

Turkey/LOC_000PAFF.1/2016-04-05
E. Dincer, A. Brinkmann, O. Hekimoglu, S. Hacioglu, K. Foldes, Z. Karapinar, P. F. Polat, B. Oguz, O. Orunc Kilinc, P. Hagedorn, N. Ozer, A. Ozkul, A. Nitsche & K. Ergunay

Hacettepe University Faculty of Medicine, Department of Medical Microbiology Virology Unit

Sample details

Collection date
2016-04-05
Earliest release date
2017-07-22
Sampling location
Turkey
Isolate name
ET37

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-07 16:45insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2017-07-22
INSDC accession L

Submission details

Submission ID
KY963541.1.L
Submitting group
Date submitted
2026-04-07 16:45:43 UTC
Date released
2026-04-07 16:52:30 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs L
89
Length L
460 (3.8%)
Variant L
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

L

  • T6712C
  • C6715T
  • C6718T
  • C6721T
  • A6724G
  • A6727G
  • A6730G
  • G6733T
  • A6736C
  • T6745C
  • G6748A
  • T6760A
  • A6763G
  • C6766T
  • A6772G
  • G6778A
  • A6784T
  • T6787C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

RdRp

  • RdRp:A2330T
Deletions
N/A
Insertions
N/A

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