This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.
X
Loculus
Crimean-Congo Hemorrhagic Fever Virus
Crimean-Congo Hemorrhagic Fever Virus
Test Dummy Organism
Test organism (without consensus sequences)
Ebola Sudan
Test organism (without alignment)
West Nile Virus
Browse
Submit
SeqSets
Login
Loculus
Browse
Submit
SeqSets
Login
Docs
API docs
LOC_000P928.1
Download
Download FASTA
Download metadata TSV
Display Name: China/LOC_000P928.1/1984
Moming,
A.; Zhu,
Q.; Bai,
Y.; Jin,
J.; Wu,
Q.; Su,
Z.; Tang,
S.; Zhang,
Y.; Shen,
S.; Deng,
F.
Submission details
Submission ID
OR823875.1.M
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-04-03 11:38:38 UTC
Date released
2025-04-03 11:43:22 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2025-04-03 11:38
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
Authors
Author affiliations
Wuhan Institute of Virology, Chinese Academy of Sciences
Alignment and QC metrics M
Completeness M
97.80%
Length M
5233
Total ambiguous nucs M
0
Total deleted nucs M
69
Total frame shifts M
0
Total inserted nucs M
54
Total SNPs M
993
Total unknown nucs M
0
Sample details
Earliest release date
2024-12-21
Collection country
China
Collection date
1984
Collection date (lower bound)
1984-01-01
Collection date (upper bound)
1984-12-31
Host
Host name scientific
Ixodoidea
Host taxon id
297308
INSDC
INSDC accession M
OR823875.1
NCBI release date
2024-12-21
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
M
M:
G
50
T
M:
A
51
G
M:
G
56
A
M:
A
57
C
M:
A
70
G
M:
T
71
A
M:
A
80
G
M:
C
81
T
M:
G
84
T
M:
C
85
T
M:
T
86
C
M:
A
88
G
M:
A
90
G
M:
C
92
T
M:
C
96
T
M:
T
98
C
M:
T
100
C
M:
T
102
C
Show more
Deletions
M:5169-5185, M:5194-5245
Insertions
ins_M:0:TCCCTCCCAGCCGGCAGTTTACAATGCTGCGAACTAAGGATCTCATCTGGACAT
Amino acid mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
GPC
GPC:
H
2
Y
GPC:
I
3
T
GPC:
S
4
P
GPC:
M
6
L
GPC:
Y
7
C
GPC:
I
9
V
GPC:
C
15
W
GPC:
G
16
S
GPC:
G
18
E
GPC:
E
19
G
GPC:
T
20
S
GPC:
S
23
L
GPC:
H
24
S
GPC:
E
26
K
GPC:
R
28
Q
GPC:
N
30
S
GPC:
K
31
N
GPC:
D
33
S
Show more
Deletions
GPC:197, GPC:209, GPC:210
Insertions
ins_GPC:212:QPV
Load sequences
Report an issue with this sequence or metadata
Create GitHub issue