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Loculus
Crimean-Congo Hemorrhagic Fever Virus
Crimean-Congo Hemorrhagic Fever Virus
Test Dummy Organism
Test organism (without consensus sequences)
Ebola Sudan
Test organism (without alignment)
West Nile Virus
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LOC_000P845.1
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Display Name: China/LOC_000P845.1/1988
Moming,
A.; Zhu,
Q.; Bai,
Y.; Jin,
J.; Wu,
Q.; Su,
Z.; Tang,
S.; Zhang,
Y.; Shen,
S.; Deng,
F.
Submission details
Submission ID
OR047163.1.M
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-11 18:18:53 UTC
Date released
2025-03-11 18:23:22 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2025-03-11 18:18
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
Authors
Author affiliations
Wuhan Institute of Virology, Chinese Academy of Sciences
Alignment and QC metrics M
Completeness M
99.55%
Length M
5327
Total ambiguous nucs M
0
Total deleted nucs M
16
Total frame shifts M
0
Total inserted nucs M
1
Total SNPs M
589
Total unknown nucs M
0
Sample details
Earliest release date
2023-08-21
Collection country
China
Collection date
1988
Collection date (lower bound)
1988-01-01
Collection date (upper bound)
1988-12-31
INSDC
INSDC accession M
OR047163.1
NCBI release date
2023-08-21
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
M
M:
T
68
C
M:
G
76
A
M:
A
80
G
M:
C
85
T
M:
A
88
G
M:
C
92
T
M:
A
107
G
M:
A
112
G
M:
A
117
G
M:
C
119
T
M:
C
126
T
M:
A
128
G
M:
G
136
A
M:
A
146
G
M:
G
149
A
M:
C
162
A
M:
A
163
G
M:
A
174
G
Show more
Deletions
M:5289-5299, M:5354-5358
Insertions
ins_M:5168:G
Amino acid mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
GPC
GPC:
Y
7
C
GPC:
I
9
V
GPC:
C
15
Y
GPC:
H
24
S
GPC:
R
28
E
GPC:
D
33
N
GPC:
T
34
V
GPC:
M
35
V
GPC:
N
41
S
GPC:
P
42
Q
GPC:
S
44
P
GPC:
P
47
L
GPC:
A
51
T
GPC:
S
53
P
GPC:
I
54
V
GPC:
P
58
S
GPC:
L
70
P
GPC:
G
85
E
Show more
Deletions
None
Insertions
None
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