This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P4EP.1

Display Name: Malaysia/LOC_000P4EP.1
S. AbuBakar, H. Y. Chee, M. F. Al-Kobaisi, J. Xiaoshan, K. B. Chua & S. K. Lam

Sample details

Collection date (upper bound)
1999-05-04
Earliest release date
1999-05-04
Collection country
Malaysia
Collection subdivision level 1
Peninsula Malaysia
Isolate name
EV71/9/97/UH3

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-01-21 15:35insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
AbuBakar S., Medical Microbiology, University Malaya, Faculty of Medicine, Kuala Lumpur 50603

INSDC

NCBI release date
1999-05-04
NCBI update date
2002-01-24
INSDC accession

Alignment and QC metrics

Length
438
Total SNPs
42
Total inserted nucs
2
Total deleted nucs
2
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
5.91%
Total stop codons
0

Submission details

Submission ID
AJ238449.1
Submitting group
Date submitted
2026-01-21 15:34:59 UTC
Date released
2026-01-21 15:36:40 UTC

Genotype

Genotype
EV-A71

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C120T
  • G121A
  • A124C
  • C126A
  • T135C
  • T138C
  • T142C
  • G143A
  • A146G
  • A148G
  • T149C
  • T155C
  • C156T
  • G157A
  • C158T
  • A159G
  • A180T
  • G208T
    • Deletions
    529, 536
    Insertions
    ins_128:CT

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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