This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P0FR.1

Display Name: LOC_000P0FR.1
Febrer-Sendra, B.; Fernandez-Soto, P.; Garcia-Bernalt Diego, J.; Crego-Vicente, B.; Negredo, A.; Munor-Bellido, J. L.; Belhassen-Garcia, M.; Sanchez-Seco, M. P.; Muro, A.; Febrer Sendra, B.

Submission details

Submission ID
OP889253.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-23 19:47:50 UTC
Date released
2024-12-23 19:52:19 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2024-12-23 19:47insdc_ingest_userOPEN
Data use terms URL
https://#TODO-MVP/open

Authors

Author affiliations
University of Salamanca, Parasitology Department

Alignment states and QC metrics S

Completeness S
12.56%
Length S
212
Total ambiguous nucs S
0
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
23
Total unknown nucs S
2

Sample details

Earliest release date
2023-05-23
Collection date (upper bound)
2023-05-23
Isolate name
P5

INSDC

INSDC accession S
OP889253.1
NCBI release date
2023-05-23

Nucleotide mutations

Substitutions

S

  • S:G815T
  • S:C823T
  • S:G838A
  • S:T862C
  • S:A865G
  • S:A868G
  • S:C871T
  • S:C874T
  • S:C880T
  • S:T898C
  • S:T904C
  • S:T928C
  • S:A931G
  • S:A937G
  • S:T946C
  • S:A956G
  • S:C958T
  • S:A961C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Substitutions

    NP

  • NP:S301G
    • Deletions
    None
    Insertions
    None