This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P02H.1

Display Name: Kazakhstan/LOC_000P02H.1/2021-05-14
Sultankulova, K. T.; Shynybekova, G. O.; Kozhabergenov, N. S.; Mukhami, N. N.; Chervyakova, O. V.; Burashev, Y. D.; Zakarya, K. D.; Nakhanov, A. K.; Barakbayev, K. B.; Orynbayev, M. B.

Submission details

Submission ID
ON783805.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-12-23 19:47:50 UTC
Date released
2024-12-23 19:51:49 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2024-12-23 19:47insdc_ingest_userOPEN
Data use terms URL
https://#TODO-MVP/open

Authors

Author affiliations
Research Institute for Biological Safety Problems, Molecular Biology and Genetic Engineering

Alignment states and QC metrics S

Completeness S
29.13%
Length S
488
Total ambiguous nucs S
1
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
69
Total unknown nucs S
0

Sample details

Earliest release date
2022-10-19
Collection subdivision level 1
Zhalagash
Collection country
Kazakhstan
Collection date
2021-05-14
Collection date (lower bound)
2021-05-14
Collection date (upper bound)
2021-05-14

INSDC

INSDC accession S
ON783805.1
NCBI release date
2022-10-19

Nucleotide mutations

Substitutions

S

  • S:T157C
  • S:C166T
  • S:C178A
  • S:T181C
  • S:T182C
  • S:T220C
  • S:G229A
  • S:C235T
  • S:C241T
  • S:C244T
  • S:A247G
  • S:T250A
  • S:G262A
  • S:A268C
  • S:G271A
  • S:T277C
  • S:T283C
  • S:T289C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Substitutions

    NP

  • NP:D116E
  • NP:T124A
  • NP:G125N
  • NP:N150H
    • Deletions
    None
    Insertions
    None