This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000NKNT.1

Tajikistan/LOC_000NKNT.1/2009-05
I. D. Petrova, Y. V. Kononova, E. V. Chausov, A. M. Shestopalov & F. H. Tishkova

State Research Center of Virology and Biotechnology 'Vector', Microscopic Researches

Sample details

Collection date
2009-05
Earliest release date
2011-12-06
Sampling location
Tajikistan (Tursunzade region)
Isolate name
TAJ/TI99/09

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2011-12-06
INSDC accession S segment

Host

Host

Submission details

Submission ID
JN402313.2.S
Submitting group
Date submitted
2026-07-03 09:31:09 UTC
Date released
2026-07-03 09:33:02 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
34
Length S segment
287 (15.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T981C
  • A987G
  • C999T
  • C1008T
  • C1011T
  • G1017T
  • G1020C
  • G1023A
  • C1032T
  • C1035T
  • C1039T
  • A1041G
  • G1044A
  • G1050A
  • A1056G
  • T1062C
  • T1080A
  • G1083C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:Q405L
Deletions
N/A
Insertions
N/A

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