This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000NKNT.1

Bulgaria/LOC_000NKNT.1/1981
N. Kalvatchev, I. Christova, S. Weaver & P. Adams

National Center of Infectious and Parasitic Diseases, Microbiology

Sample details

Collection date
1981
Earliest release date
2012-09-30
Sampling location
Bulgaria
Isolate name
Plovdiv

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2012-09-30
INSDC accession L segment

Host

Host

Submission details

Submission ID
JF807431.1.L
Submitting group
Date submitted
2026-08-28 13:42:29 UTC
Date released
2026-08-28 13:43:28 UTC

Clade & Lineage

Closest reference L segment
singleReference (variant)

Files

Annotations

Alignment and QC

Total SNPs L segment
173
Total deleted nucs L segment
1
Total frame shifts L segment
1
Frame shifts L segment
RdRp:1097-3946(nt:3363-11914)
Length L segment
1517 (12.5%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 reference

Substitutions

L segment

  • C1864G
  • A1865C
  • C1867T
  • G1876A
  • T1877C
  • A1879T
  • T1889C
  • G1912A
  • C1927T
  • T1942C
  • A1951G
  • C1957T
  • A1975C
  • C1978T
  • A1981G
  • T1993C
  • A1996G
  • T2017C
Deletions

L segment

3362
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 reference

Substitutions

RdRp

  • RdRp:N597H
  • RdRp:A719V
  • RdRp:R764K
  • RdRp:S766T
  • RdRp:T767A
  • RdRp:K769E
  • RdRp:R770K
  • RdRp:D771E
  • RdRp:G772V
  • RdRp:P774L
  • RdRp:I783A
  • RdRp:T784V
  • RdRp:S789P
  • RdRp:G798E
  • RdRp:K809R
  • RdRp:F810L
  • RdRp:G812E
  • RdRp:T956A
Deletions

RdRp

RdRp:1096
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue