This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000M3P9.1

Display Name: Russia/LOC_000M3P9.1/2021
V. A. Ternovoi, E. P. Ponomareva, N. L. Tupota, M. A. Stepaniuk & A. S. Oskina

Submission details

Submission ID
PV254387.1
Submitting group
Date submitted
2025-06-20 15:19:59 UTC
Date released
2025-06-20 15:27:53 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-06-20 15:20insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
State Research Center of Virology and Biotehnology 'Vector', Department of Molecular Virology

Alignment and QC metrics

Completeness
2.62%
Length
289
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
9
Total stop codons
0
Total unknown nucs
0

Sample details

Earliest release date
2025-04-29
Collection subdivision level 1
Astrakhan
Collection country
Russia
Collection date
2021
Collection date (lower bound)
2021-01-01
Collection date (upper bound)
2021-12-31
Isolate name
St1024/2021

Host

Host name scientific
Culex pipiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2025-04-29
NCBI update date
2025-04-29

Lineage

Lineage
1A

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • T9039C
  • T9108A
  • T9109C
  • G9147A
  • C9171T
  • C9219T
  • T9234C
  • G9261A
  • T9285C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    NS5

  • NS5:W477R
    • Deletions
    None
    Insertions
    None

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