This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000M394.1

Display Name: LOC_000M394.1
M. T. Parra, J. M. D. Anton & I. J. D. Rodriguez

Sample details

Collection date (upper bound)
2025-02-28
Earliest release date
2025-02-28

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-01-21 15:32insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-02-28
NCBI update date
2025-02-28
INSDC accession

Alignment and QC metrics

Length
11029
Total SNPs
12
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
100.00%
Total stop codons
0

Submission details

Submission ID
PH267346.1
Submitting group
Date submitted
2026-01-21 15:32:32 UTC
Date released
2026-01-21 15:51:09 UTC

Lineage

Lineage
1A

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C450T
  • A630G
  • C1465T
  • T4027C
  • C4107T
  • A4940G
  • G5280A
  • T6405C
  • T7011C
  • T8235C
  • C10338T
  • C10624T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    NS2A

  • NS2A:C168R

    • NS3

  • NS3:Q110R

    • env

  • env:L167F
    • Deletions
    None
    Insertions
    None

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