This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000M30N.1

Display Name: LOC_000M30N.1
J. Lemoine

Sample details

Collection date (upper bound)
2025-01-29
Earliest release date
2025-01-29

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-01-21 15:32insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-01-29
NCBI update date
2025-01-29
INSDC accession

Alignment and QC metrics

Length
625
Total SNPs
47
Total inserted nucs
0
Total deleted nucs
94
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
1
Frame shifts
NS5:898-905(nt:10372-10395)
Completeness
6.52%
Total stop codons
0

Submission details

Submission ID
PC395791.1
Submitting group
Date submitted
2026-01-21 15:32:32 UTC
Date released
2026-01-21 15:51:09 UTC

Lineage

Lineage
1B

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C10408T
  • G10420A
  • C10422T
  • A10424T
  • A10426G
  • A10428T
  • G10430T
  • C10435T
  • A10436G
  • A10439G
  • G10444T
  • T10448C
  • G10455A
  • A10460G
  • G10468T
  • T10469G
  • G10470T
  • A10487G
    • Deletions
    10314-10371, 10378-10406, 10475-10481
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions
    Deletions
    NS5:865-897
    Insertions
    None

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