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LOC_000M26B.1
Download
Download FASTA
Download metadata TSV
Sweden/LOC_000M26B.1/2014-09-08
R. Dyrdak,
M. Mastafa,
L. Thebo,
E. Eriksson,
A. Bjerkner,
R. Neher &
J. Albert
Karolinska University Hospital, Department of Clinical Microbiology
Sample details
Collection date
2014-09-08
Earliest release date
2018-09-24
Sampling location
Sweden
Isolate name
EVD68_SWE_007_140908
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-06-12 21:09
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2018-09-24
NCBI update date
2018-09-24
INSDC accession
MH674114.1
Host
Host
human (Homo sapiens)
Submission details
Submission ID
MH674114.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-06-12 21:09:01 UTC
Date released
2026-06-12 21:17:57 UTC
Clade
Clade EV-D68
A1
Genotype
Genotype
EV-D68
Alignment and QC
Total SNPs
865
Total deleted nucs
35
Length
7179 (97.9%)
Nucleotide mutations
Mutations called relative to the
AY426531.1
reference
Substitutions
A
88
T
T
89
C
C
95
T
T
103
C
C
114
T
T
118
C
C
122
T
A
124
G
A
126
G
G
139
A
C
156
T
T
158
C
T
187
C
G
188
A
C
203
T
C
204
T
A
232
T
T
262
C
Show more
Deletions
688-722
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
AY426531.1
reference
Substitutions
2A
2A:
I
22
T
2A:
R
65
K
2A:
I
71
V
2A:
V
144
A
2B
2B:
I
64
V
2C
2C:
T
34
N
2C:
K
58
S
2C:
R
72
Q
2C:
S
98
A
2C:
A
102
T
2C:
I
154
V
2C:
N
273
G
2C:
T
275
A
2C:
V
304
I
2C:
I
311
M
2C:
K
313
R
3A
3A:
I
46
M
3A:
V
53
L
3C
3C:
V
30
I
3C:
I
46
T
3C:
L
77
M
3C:
C
93
Y
3D
3D:
M
11
V
3D:
V
88
T
3D:
N
95
S
3D:
E
101
D
3D:
S
135
T
3D:
K
139
R
3D:
I
212
M
3D:
V
277
I
3D:
I
278
V
3D:
K
307
R
3D:
H
345
Y
3D:
V
349
I
3D:
I
360
V
VP1
VP1:
S
1
L
VP1:
N
2
D
VP1:
G
6
A
VP1:
V
13
I
VP1:
T
46
S
VP1:
G
76
S
VP1:
K
84
R
VP1:
S
95
E
VP1:
G
97
Q
VP1:
H
99
D
VP1:
I
131
V
VP1:
N
140
S
VP1:
G
141
S
VP1:
N
142
S
VP1:
N
143
S
VP1:
D
144
N
VP1:
S
145
N
VP1:
M
148
V
Show more
VP2
VP2:
S
59
A
VP2:
R
67
K
VP2:
S
73
T
VP2:
N
74
G
VP2:
N
144
T
VP2:
R
151
E
VP2:
N
156
T
VP2:
I
167
L
VP2:
V
195
A
VP2:
V
211
I
VP2:
M
222
V
VP2:
V
225
M
VP3
VP3:
I
40
V
VP3:
M
46
I
VP3:
I
47
V
VP3:
D
59
E
VP3:
G
60
D
VP3:
N
62
V
VP3:
E
65
Q
VP3:
R
68
K
VP3:
Q
74
L
VP3:
A
75
T
VP3:
L
77
V
VP3:
I
153
V
VP3:
I
163
V
VP3:
I
166
V
VP3:
S
180
N
VP3:
D
208
N
VP3:
I
216
V
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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