This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LU5P.1

Italy/205417-21/2009-01-01
K. Sekulin, P. Cordioli & N. Nowotny

University of Veterinary Medicine Vienna, Viral Zoonoses, Emerging and Vector-Borne Infections Group

Sample details

Collection date
2009
Earliest release date
2014-06-21
Sampling location
Italy (Lombardy)
Isolate name
205417-21

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2014-06-21
NCBI update date
2014-06-21
INSDC accession

Host

Host

Submission details

Submission ID
KF114262.1
Submitting group
Date submitted
2026-09-09 16:34:08 UTC
Date released
2026-09-09 16:47:17 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
93
Length
2593 (23.5%)
Amino Acid Mutations from founder clade
  • NS1:A70S
  • env:K93R
  • prM:T103A
Variant
False

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • T195A
  • T234C
  • C282T
  • G354A
  • C381T
  • C483T
  • G492A
  • G495T
  • C561T
  • C600T
  • T606C
  • A630G
  • T639C
  • A729G
  • A772G
  • G786A
  • T826C
  • T850C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS1

  • NS1:A70S

env

  • env:I126T
  • env:V159I
  • env:L167F

prM

  • prM:T103A
Deletions
N/A
Insertions
N/A

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